Job Description P31471 Confidence 99.72% Date Thu Jan 5 11:48:00 GMT 2012 Rank 75 Aligned Residues 210 % Identity 9% Template c3mveB_ PDB info PDB header:lyase Chain: B: PDB Molecule:upf0255 protein vv1_0328; PDBTitle: crystal structure of a novel pyruvate decarboxylase Resolution 2.20 Å

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		142	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.
Predicted Secondary structure
Query SS confidence
Query Sequence		D	L	I	A	I	T	Y	H	S	N	A	L	Q	S	E	R	Q	M	Y	V	W	T	P	P	G	Y	T	G	M	G	E	P	L	P	V	L	Y	F	Y	H	G	F	G	D	T	G	R	S	A	I	D	Q	G	R	I	P	Q	I	M	D	N	L	L	A	E	G	K	I	K	P	M	L	V	V	I	P	D	T	E	T
Query Conservation
Alig confidence											.	.															.	.	.	.																						.	.	.	.	.	.	.	.	.
Template Conservation											.	.															.	.	.	.																						.	.	.	.	.	.	.	.	.
Template Sequence		I	I	K	Q	L	E	I	P	F	.	.	E	K	G	K	I	T	A	H	L	H	L	T	N	T	.	.	.	.	D	K	P	H	P	V	V	I	V	S	A	G	L	D	S	L	Q	T	D	M	W	.	.	.	.	.	.	.	.	.	R	L	F	R	D	H	L	A	K	H	D	I	A	M	L	T	V	D	M	P	S
Template Known Secondary structure											.	.	T	T										S		S	.	.	.	.	S	S											T	T	S		G	G	G			.	.	.	.	.	.	.	.	.					T	T	G	G	G	G	T									T	T
Template Predicted Secondary structure											.	.															.	.	.	.																						.	.	.	.	.	.	.	.	.
Template SS confidence
		167	.	.	170	.	.	.	.	.			.	.	.	.	180	.	.	.	.	.	.	.	.	.					190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210										.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.
		222	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.
Predicted Secondary structure
Query SS confidence
Query Sequence		D	A	K	G	I	I	P	E	D	F	V	P	Q	E	R	R	K	V	F	Y	P	L	N	A	K	A	A	D	R	E	L	M	N	D	I	I	P	L	I	S	K	R	F	N	V	R	K	D	A	D	G	R	A	L	A	G	L	S	Q	G	G	Y	Q	A	L	V	S	G	M	N	H	L	E	S	F	G	W	L	A	T
Query Conservation
Alig confidence													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																				.	.
Template Conservation													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																				.	.
Template Sequence		V	G	Y	S	S	K	Y	P	L	T	E	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	D	Y	S	R	L	H	Q	A	V	L	N	E	L	F	S	I	P	Y	V	.	.	D	H	H	R	V	G	L	I	G	F	R	F	G	G	N	A	M	V	R	L	S	F	L	E	Q	E	K	I	K	A	C	V	I
Template Known Secondary structure		S	G	G	G	T	T	S				S	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.		T	T										G	G	G		T	T		.	.											T													T	G	G	G
Template Predicted Secondary structure													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																				.	.
Template SS confidence
		232	.	.	.	.	.	.	.	240	.	.																.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.			.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.
		302	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.																																		.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.
Predicted Secondary structure																										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		F	S	G	V	T	T	T	T	V	P	D	E	G	V	A	A	R	L	N	D	P	A	A	I	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	N	Q	Q	L	R	N	F	T	V	V	V	G	D	K	D	V	V	T	G	K	D	I	A
Query Conservation																										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		L	G	A	P	I	H	D	I	F	A	S	P	Q	K	L	Q	Q	M	P	K	M	Y	L	D	V	L	A	S	R	L	G	K	S	V	V	D	I	Y	S	L	S	G	Q	M	A	A	W	S	L	K	V	Q	G	F	L	S	S	R	K	T	K	V	P	I	L	A	M	S	L	E	G	D	P	V	S	P	Y	S	D	N
Template Known Secondary structure			S				S										T	T	S												T	T		S											G	G	G	G		T	T	T	T	T	T	T	T	S	S		B	S	S								T	T		S	S	S
Template Predicted Secondary structure
Template SS confidence
		295	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.
		349	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	L	K	T	E	L	E	Q	K	K	I	N	F	D	Y	Q	E	Y	P	G	L	N	H	E	M	D	V	W	R	P	A	Y	A	A	F	V	Q	K	L
Query Conservation
Alig confidence												.	.	.								.
Template Conservation												.	.	.								.
Template Sequence		Q	M	V	A	F	F	S	T	Y	G	.	.	.	K	A	K	K	I	S	S	.	K	T	I	T	Q	G	Y	E	Q	S	L	D	L	A	I	K	W	L
Template Known Secondary structure							T	B	T	T		.	.	.							S	.	S		S	T	T	S
Template Predicted Secondary structure												.	.	.								.
Template SS confidence
		375	.	.	.	.	380	.	.	.	.				.	.	.	.	.	390	.		.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions