Job Description P31471 Confidence 98.40% Date Thu Jan 5 11:48:00 GMT 2012 Rank 236 Aligned Residues 176 % Identity 16% Template c3k1dA_ PDB info PDB header:transferase Chain: A: PDB Molecule:1,4-alpha-glucan-branching enzyme; PDBTitle: crystal structure of glycogen branching enzyme synonym: 1,4-alpha-d-2 glucan:1,4-alpha-d-glucan 6-glucosyl-transferase from mycobacterium3 tuberculosis h37rv Resolution 2.33 Å

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		49	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70		.	.	.	.	.	.	.	.		.	80	.	.	.	.	.	.	.	.		.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.
Predicted Secondary structure																								.									.											.
Query SS confidence																								.									.											.
Query Sequence		V	T	F	R	Y	F	A	P	G	A	K	N	V	S	V	V	V	G	V	P	V	P	.	D	N	I	H	P	M	T	K	.	D	E	A	G	V	W	S	W	R	T	.	P	I	L	K	G	N	L	Y	E	Y	F	F	N	V	D	G	V	R	S	I	D	T	G	T	A	M	T	N	P	Q	R	Q	V	N	S	S	M
Query Conservation																								.									.											.
Alig confidence																								.									.											.
Template Conservation
Template Sequence		V	S	F	A	V	W	A	P	N	A	K	G	V	S	L	I	G	E	F	N	G	W	N	G	H	E	A	P	M	R	V	L	G	P	S	G	V	W	E	L	F	W	P	D	F	P	C	D	G	L	Y	K	F	R	V	H	G	A	D	G	V	V	T	D	R	A	D	P	F	A	F	G	T	E	V	P	P	Q	T	A
Template Known Secondary structure									T	T		S							G	G	G	T	T				S		B					G	G	G									T			T	T										T	T	S								T	T		S	S	B			T	T
Template Predicted Secondary structure
Template SS confidence
		147	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.
		126	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.							.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																																																				.	.	.	.	.	.
Query SS confidence																																																				.	.	.	.	.	.
Query Sequence		I	L	V	P	G	S	Y	L	D	T	R	S	V	A	H	G	D	L	I	A	I	T	Y	H	S	N	A	L	Q	S	E	R	Q	M	Y	V	W	T	P	P	G	Y	T	G	M	G	E	P	L	P	.	.	.	.	.	.	V	L	Y	F	Y	H	G	F	G	D	T	G	R	S	A	I	D	Q	G	R	I	P	Q	I
Query Conservation																																																				.	.	.	.	.	.
Alig confidence													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.													.	.	.	.	.	.								.	.	.	.	.
Template Conservation													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																										.	.	.	.	.
Template Sequence		S	R	V	T	S	S	D	Y	T	W	G	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	D	D	D	W	M	A	G	R	A	L	R	N	P	V	N	E	A	M	S	T	Y	E	V	H	L	.	.	.	.	.	G	S	W	R	P	G	L	S	Y	R	Q	L
Template Known Secondary structure												S	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.									T	T			G	G	G	S									T	.	.	.	.	.	T	T	S	S	T	T
Template Predicted Secondary structure													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																										.	.	.	.	.
Template SS confidence
		227	.	.	230	.	.	.	.	.	.	.																												.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.						.	.	.	.	.	.	.	270	.	.	.	.
		200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		M	D	N	L	L	A	E	G	K	I	K	P	M	L	V	V	I	P	D	T	E	T	D	A	K	G	I	I	P	E	D	F	V	P	Q	E	R	R	K	V	F	Y	P	L	N	A	K	A	A	D	R	E	L	M	N	D	I
Query Conservation
Alig confidence
Template Conservation
Template Sequence		A	R	E	L	T	D	Y	I	V	D	Q	G	F	T	H	V	E	L	L	P	V	A	E	H	P	F	A	G	S	W	G	Y	Q	V	T	S	Y	Y	A	P	T	S	R	F	G	T	P	D	D	F	R	A	L	V	D	A	L
Template Known Secondary structure													T		S					S						S		G	G	G	T	T		S		S							G	G	G
Template Predicted Secondary structure
Template SS confidence
		275	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions