Job Description P31471 Confidence 99.66% Date Thu Jan 5 11:48:00 GMT 2012 Rank 84 Aligned Residues 204 % Identity 14% Template c3h04A_ PDB info PDB header:structural genomics, unknown function Chain: A: PDB Molecule:uncharacterized protein; PDBTitle: the crystal structure of the protein with unknown function from2 staphylococcus aureus subsp. aureus mu50 Resolution 1.90 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		145	.	.	.	.	150		.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.
Predicted Secondary structure								.
Query SS confidence								.
Query Sequence		A	I	T	Y	H	S	.	N	A	L	Q	S	E	R	Q	M	Y	V	W	T	P	P	G	Y	T	G	M	G	E	P	L	P	V	L	Y	F	Y	H	G	F	G	D	T	G	R	S	A	I	D	Q	G	R	I	P	Q	I	M	D	N	L	L	A	E	G	K	I	K	P	M	L	V	V	I	P	D	T	E	T	D	A
Query Conservation								.
Alig confidence								.																	.	.					.	.																												.	.	.	.	.	.	.
Template Conservation																									.	.					.	.																												.	.	.	.	.	.	.
Template Sequence		E	I	K	Y	K	V	I	T	K	D	A	F	A	L	P	Y	T	I	I	K	A	K	N	.	.	Q	P	T	K	.	.	G	V	I	V	Y	I	H	G	G	G	L	M	F	G	K	A	N	D	L	S	P	Q	Y	I	D	I	L	.	.	.	.	.	.	.	T	E	H	Y	D	L	I	Q	L	S	Y	R	L	L	P
Template Known Secondary structure										T	T	S											S	S	.	.	S	S		S	.	.									S	T	T	T	S			T	T		S									.	.	.	.	.	.	.	T	T	T											T	T
Template Predicted Secondary structure																									.	.					.	.																												.	.	.	.	.	.	.
Template SS confidence
		3	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.			.	.	.	.			30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.								.	.	.	60	.	.	.	.	.	.	.	.	.	70	.
		224	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		K	G	I	I	P	E	D	F	V	P	Q	E	R	R	K	V	F	Y	P	L	N	A	K	A	A	D	R	E	L	M	N	D	I	I	P	L	I	S	K	R	F	N	V	R	K	D	A	D	G	R	A	L	A	G	L	S	Q	G	G	Y	Q	A	L	V	S	G	M	N	H	L	E	S	F	G	W	L	A	T	F	S
Query Conservation
Alig confidence					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																				.	.	.	.																												.	.
Template Conservation					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																				.	.	.	.																												.	.
Template Sequence		E	V	S	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	L	D	C	I	I	E	D	V	Y	A	S	F	D	A	I	Q	S	Q	Y	.	.	.	.	S	N	C	P	I	F	T	F	G	R	S	S	G	A	Y	L	S	L	L	I	A	R	D	R	D	I	D	.	.	G	V	I	D	F	Y
Template Known Secondary structure		T	S		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																		T	T	.	.	.	.	T	T	S								T													S			S	.	.						S
Template Predicted Secondary structure					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																				.	.	.	.																												.	.
Template SS confidence
		72	.	.																				.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.					.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120			.	.	.	.	.	.
		304	.	.	.	.	.	310	.																																																										.	.	.	.	.	.	.	.	320	.	.	.	.	.	.
Predicted Secondary structure										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		G	V	T	T	T	T	V	P	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	D	E	G	V	A	A	R	L	N	D	P	A	A	I	N
Query Conservation										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		G	Y	S	R	I	N	T	E	P	F	K	T	T	N	S	Y	Y	A	K	I	A	Q	S	I	N	E	T	M	I	A	Q	L	T	S	P	T	P	V	V	Q	D	Q	I	A	Q	R	F	L	I	Y	V	Y	A	R	G	T	G	K	W	I	N	M	I	N	I	A	D	Y	T	D	S	K	Y	N	I	A	P	D	E	L
Template Known Secondary structure				S		S		S					S										T	T	S							T	T	S		S	S			S	S		S	S	G	G	G											T									S		T	T	S	G	G	G	S
Template Predicted Secondary structure
Template SS confidence
		127	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.
		327	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.									.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.
Predicted Secondary structure																																															.	.	.	.	.	.	.	.
Query SS confidence																																															.	.	.	.	.	.	.	.
Query Sequence		Q	Q	L	R	N	F	T	V	V	V	G	D	K	D	V	V	T	G	K	D	I	A	G	L	K	T	E	L	E	Q	K	K	I	N	F	D	Y	Q	E	Y	P	G	L	N	H	.	.	.	.	.	.	.	.	E	M	D	V	W	R	P	A	Y	A	A	F	V	Q	K	L
Query Conservation																																															.	.	.	.	.	.	.	.
Alig confidence																					.	.	.																								.	.	.	.	.	.	.	.
Template Conservation																					.	.	.
Template Sequence		K	T	L	P	P	V	F	I	A	H	C	N	G	D	Y	D	V	P	V	.	.	.	E	E	S	E	H	I	M	N	H	V	P	H	S	T	F	E	R	V	N	K	N	E	H	D	F	D	R	R	P	N	D	E	A	I	T	I	Y	R	K	V	V	D	F	L	N	A	I
Template Known Secondary structure		T	T										T	T		S	S	S		T	.	.	.								T	T		S	S								S	S		S		T	T	S	S
Template Predicted Secondary structure																					.	.	.
Template SS confidence
		207	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.				.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions