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Job DescriptionP31471
Confidence100.00%DateThu Jan 5 11:48:00 GMT 2012
Rank13Aligned Residues238
% Identity16%Templatec3gffA_
PDB info PDB header:hydrolaseChain: A: PDB Molecule:iroe-like serine hydrolase; PDBTitle: crystal structure of iroe-like serine hydrolase (np_718593.1) from2 shewanella oneidensis at 2.12 a resolution
Resolution2.12 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   142.......150.........160.........170.........180.........190.........200.........210.........220.
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Query Sequence  DLIAITYHSNALQSERQMYVWTPPGYTGMGEPLPVLYFYHGFGDTGRSAIDQGRIPQIMDNLLAEGKIKPMLVVIPDTET
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Template Sequence  EYQSKRLESRLLKETREYVIALPEGYAQSLEAYPVVYLLDG. . . . . EDQFDHXASLLQFLSQGTXPQIPKVIIVGIHNTN
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TTTT

TTGGGS


SS.....T
SSS
SS




SS
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   10.........20.........30.........40.........50 .........60.........70.........80....
 
   222.......230.........240.........250.........260.........270.........280.........290......
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Query Sequence  . . . . . DAKGIIPEDFVPQERRKVFYPLNAKAADRELMNDIIPLISKRFNVRKDADGRALAGLSQGGYQALVSGMNHLESF
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Template Sequence  RXRDYTPTHTLVLPSGNKGNPQYQHTGGAGRFLDFIEKELAPSIESQLRTN. . . GINVLVGHSFGGLVAXEALRTDRPLF
Template Known Secondary structure  S
SS

SB
TTSSB

GGGGG


TS
...TTT
SS
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   85....90.........100.........110.........120.........130..... ....140.........150.........160.
 
   297..300.........310.........320.........330......... 340.........350...... ...360.....
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Query Sequence  GWLATFSGVTTTTVPDEGVAARLNDPAAINQQLRNFTVVVGDK. . . . . . . . DVVTGKDIAGLKTELEQ. . . KKINFDYQE
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Template Sequence  SAYLALDTSLWFDSP. HYLTLLEERVVKGDFKQKQLFXAIANNPLSPGFGVSSYHKDLNLAFADKLTKLAPKGLGFXAKY
Template Known Secondary structure  SS

TTTTTT.


SS


STTT



TT
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   162.......170...... ...180.........190.........200.........210.........220.........230.........240
 
   366...370.........380.........
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Query Sequence  YPGLNHEMDVWRPAYAAFVQKLFK
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Template Sequence  YPEETHQ. SVSHIGLYDGIRHLFK
Template Known Secondary structure 
TT

TT.TG
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   241...... ..250.........260...
 
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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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