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Job DescriptionP31471
Confidence100.00%DateThu Jan 5 11:48:00 GMT 2012
Rank9Aligned Residues236
% Identity19%Templatec3e4dD_
PDB info PDB header:hydrolaseChain: D: PDB Molecule:esterase d; PDBTitle: structural and kinetic study of an s-formylglutathione2 hydrolase from agrobacterium tumefaciens
Resolution2.01 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   141........150.........160.........170.........180.........190.........200.........210.........220
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Query Sequence  GDLIAITYHSNALQSERQMYVWTPPGYTGMGEPLPVLYFYHGFGDTGRSAIDQGRIPQIMDNLLAEGKIKPMLVVIPDTE
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Template Sequence  GXQGVFSHQSETLKSEXTFAVYVPPKAI. . HEPCPVVWYLSGLTCTHANVXEKGEYRRXASEL. . . . . . . GLVVVCPDTS
Template Known Secondary structure  TTTT
GGGG..TS


TT

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   12.......20.........30......... 40.........50.........60.........70.. .......80..
 
   221........230....... ..240.........250.........260.........270.........280.........290..
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Query Sequence  TDAKGIIPEDFVPQERR. . . . . . . . KVFYPLNAKAADRELMNDIIPLISKRFNVRKDADGRALAGLSQGGYQALVSGMNH
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Template Sequence  PRGNDVPDELTNWQXGKGAGFYLDATEEPWSEHYQXYSYVTEELPALIGQHFRA. . DXSRQSIFGHSXGGHGAXTIALKN
Template Known Secondary structure 

SSSS


TT
TTSBTTB
TTSB

STTGGGT
BTSS..BT
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   83......90.........100.........110.........120.........130...... ...140.........150.........160
 
   293......300.........310......... 320.........330.........340...... ...350.....
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Query Sequence  LESFGWLATFSGVTTTTVPDEGVAARL. . . . . . . . . . . . . . . NDPAAINQQLRNFTVVVGDKDVVTGKD. . IAGLKTELE
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Template Sequence  PERFKSCSAFAPIVAPSSADWSEPALEKYLGADRAAWRRYDACSLVEDGARFPEFLIDQGKADSFLEKGLRPWLFEEAIK
Template Known Secondary structure  TTT
S
BS

S
GGG
TTT
S
TTTTGGG
TT


STT
TTT
TTT
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   161........170.........180.........190.........200.........210.........220.........230.........240
 
   356...360.........370.........380.......
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Query Sequence  QKKINFDYQEYPGLNHEMDVWRPAYAAFVQKL
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Template Sequence  GTDIGLTLRXHDRYDHSYYFISTFXDDHLKWH
Template Known Secondary structure  TS

TT

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   241........250.........260.........270..
 
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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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