Job Description P31471 Confidence 98.56% Date Thu Jan 5 11:48:00 GMT 2012 Rank 225 Aligned Residues 201 % Identity 12% Template c3ds8A_ PDB info PDB header:structural genomics, unknown function Chain: A: PDB Molecule:lin2722 protein; PDBTitle: the crysatl structure of the gene lin2722 products from listeria2 innocua Resolution 1.80 Å

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		177	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.		.	.	.	210	.	.	.	.	.	.	.	.	.	220	.				.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.
Predicted Secondary structure																																.																.	.	.
Query SS confidence																																.																.	.	.
Query Sequence		L	Y	F	Y	H	G	F	G	D	T	G	R	S	A	I	D	Q	G	R	I	P	Q	I	M	D	N	L	L	A	E	.	G	K	I	K	P	M	L	V	V	I	P	D	T	E	T	.	.	.	D	A	K	G	I	I	P	E	D	F	V	P	Q	E	R	R	K	V	F	Y	P	L	N	A	K	A	A	D	R	E	L
Query Conservation																																.																.	.	.
Alig confidence																	.	.	.	.	.	.										.																.	.	.
Template Conservation																	.	.	.	.	.	.
Template Sequence		I	I	L	I	H	G	S	G	G	N	A	S	S	L	D	.	.	.	.	.	.	K	X	A	D	Q	L	X	N	E	Y	R	S	S	N	E	A	L	T	X	T	V	N	S	E	G	K	I	K	F	E	G	K	L	T	K	D	A	K	R	P	I	I	K	F	G	F	E	Q	N	Q	A	T	P	D	D	W	S	K	W
Template Known Secondary structure								T	T			T	T	T	T		.	.	.	.	.	.									T	T													T	T	T						S				T	T		S	S								S	S	T	T	S
Template Predicted Secondary structure																	.	.	.	.	.	.
Template SS confidence
		6	.	.	.	10	.	.	.	.	.	.	.	.	.	20							.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.
		253	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.						.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.															.	.
Predicted Secondary structure																																													.	.	.	.	.																	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																													.	.	.	.	.																	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		M	N	D	I	I	P	L	I	S	K	R	F	N	V	R	K	D	A	D	G	R	A	L	A	G	L	S	Q	G	G	Y	Q	A	L	V	S	G	M	N	H	L	E	S	.	.	.	.	.	F	G	W	L	A	T	F	S	G	V	T	T	T	T	V	P	.	.	.	.	.	.	.	.	.	.	.	.	.	.	D	E
Query Conservation																																													.	.	.	.	.																	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence														.	.	.	.																												.	.	.	.	.																	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation														.	.	.	.
Template Sequence		L	K	I	A	X	E	D	L	K	S	R	Y	.	.	.	.	G	F	T	Q	X	D	G	V	G	H	S	N	G	G	L	A	L	T	Y	Y	A	E	D	Y	A	G	D	K	T	V	P	T	L	R	K	L	V	A	I	G	S	P	F	N	D	L	D	P	N	D	N	G	X	D	L	S	F	K	K	L	P	N	S	T
Template Known Secondary structure														.	.	.	.			S								T													S	T	T		T	T	S										S			T	T		S							S		T	T		S	S		S	S
Template Predicted Secondary structure														.	.	.	.
Template SS confidence
		80	.	.	.	.	.	.	.	.	.	90	.					.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.
		314	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.							340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.				.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.
Predicted Secondary structure																												.	.	.	.	.	.																							.	.	.
Query SS confidence																												.	.	.	.	.	.																							.	.	.
Query Sequence		G	V	A	A	R	L	N	D	P	A	A	I	N	Q	Q	L	R	N	F	T	V	V	V	G	D	K	.	.	.	.	.	.	D	V	V	T	G	K	D	I	A	G	L	K	T	E	L	E	Q	K	K	I	N	F	.	.	.	D	Y	Q	E	Y	P	G	L	N	H	E	M	D	V	W	R	P	A	Y	A	A	F	V
Query Conservation																												.	.	.	.	.	.																							.	.	.
Alig confidence																												.	.	.	.	.	.																							.	.	.
Template Conservation
Template Sequence		P	Q	X	D	Y	F	I	K	N	Q	T	E	V	S	P	D	L	E	V	L	A	I	A	G	E	L	S	E	D	N	P	T	D	G	I	V	P	T	I	S	S	L	A	T	R	L	F	X	P	G	S	A	K	A	Y	I	E	D	I	Q	V	G	E	D	A	V	H	Q	T	L	H	E	T	P	K	S	I	E	K	T
Template Known Secondary structure										T	G	G	G	S		T	T										S	B	T	T	B		B		S	S	S	B					T	G	G	G	G	T	S	B	T	T	B	S									S	G	G	G		G	G	G	G	G	G	S
Template Predicted Secondary structure
Template SS confidence
		156	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.
		385	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Q	K	L
Query Conservation
Alig confidence
Template Conservation
Template Sequence		Y	W	F
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		236	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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