Job Description P31471 Confidence 99.28% Date Thu Jan 5 11:48:00 GMT 2012 Rank 127 Aligned Residues 206 % Identity 13% Template c3d59B_ PDB info PDB header:hydrolase Chain: B: PDB Molecule:platelet-activating factor acetylhydrolase; PDBTitle: crystal structure of human plasma platelet activating2 factor acetylhydrolase Resolution 1.50 Å

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		142	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.																																																	170	.	.	.
Predicted Secondary structure																														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		D	L	I	A	I	T	Y	H	S	N	A	L	Q	S	E	R	Q	M	Y	V	W	T	P	P	G	Y	T	G	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	M	G	E	P
Query Conservation																														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		S	V	G	C	T	D	L	M	F	D	H	T	N	K	G	T	F	L	R	L	Y	Y	P	S	Q	D	N	D	R	L	D	T	L	W	I	P	N	K	E	Y	F	W	G	L	S	K	F	L	G	T	H	W	L	M	G	N	I	L	R	L	L	F	G	S	M	T	T	P	A	N	W	N	S	P	L	R	P	G	E	K
Template Known Secondary structure											S	S	S	T	T	S									B	S									S	S		S												T			T											T	T				S	S			T			B			S
Template Predicted Secondary structure
Template SS confidence
		64	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.
		174	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.
Predicted Secondary structure																																																																								.	.	.	.	.	.	.	.	.	.
Query SS confidence																																																																								.	.	.	.	.	.	.	.	.	.
Query Sequence		L	P	V	L	Y	F	Y	H	G	F	G	D	T	G	R	S	A	I	D	Q	G	R	I	P	Q	I	M	D	N	L	L	A	E	G	K	I	K	P	M	L	V	V	I	P	D	T	E	T	D	A	K	G	I	I	P	E	D	F	V	P	Q	E	R	R	K	V	F	Y	P	L	.	.	.	.	.	.	.	.	.	.
Query Conservation																																																																								.	.	.	.	.	.	.	.	.	.
Alig confidence																				.	.	.	.	.	.	.	.	.	.																																											.	.	.	.	.	.	.	.	.	.
Template Conservation																				.	.	.	.	.	.	.	.	.	.
Template Sequence		Y	P	L	V	V	F	S	H	G	L	G	A	F	R	T	L	Y	S	.	.	.	.	.	.	.	.	.	.	A	I	G	I	D	L	A	S	H	G	F	I	V	A	A	V	E	H	R	D	R	S	A	S	A	T	Y	Y	F	K	D	Q	S	A	A	E	I	G	D	K	S	W	L	Y	L	R	T	L	K	Q	E	E
Template Known Secondary structure											T	T			T	T	T	T		.	.	.	.	.	.	.	.	.	.									T	T										S	S		S	S						S	S						T	T
Template Predicted Secondary structure																				.	.	.	.	.	.	.	.	.	.
Template SS confidence
		144	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.											.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.
												244	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.															.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.
Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.																			.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence		.	.	.	.	.	.	.	.	.	.																			.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		.	.	.	.	.	.	.	.	.	.	N	A	K	A	A	D	R	E	L	M	N	D	I	I	P	L	I	S	.	.	.	.	.	.	.	.	.	.	.	.	.	.	K	R	F	N	V	R	K	D	A	D	G	R	A	L	A	G	L	S	Q	G	G	Y	Q	A	L	V	S	G	M	N	H	L	E	S	F	G	W	L
Query Conservation		.	.	.	.	.	.	.	.	.	.																			.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.																			.	.	.	.	.	.	.	.	.	.	.	.	.	.																																	.
Template Conservation																																																																												.
Template Sequence		E	T	H	I	R	N	E	Q	V	R	Q	R	A	K	E	C	S	Q	A	L	S	L	I	L	D	I	D	H	G	K	P	V	K	N	A	L	D	L	K	F	D	M	E	Q	L	K	D	S	I	D	R	E	K	I	A	V	I	G	H	S	F	G	G	A	T	V	I	Q	T	L	S	E	D	Q	.	R	F	R	C	G
Template Known Secondary structure																													T	T						S	S			S			G	G	G	G	T	T													T														T	.	T
Template Predicted Secondary structure																																																																												.
Template SS confidence
		214	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.		.	.	290	.	.
		300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	T	F	S	G	V	T	T	T	T	V	P	D	E	G	V	A	A	R	L	N	D	P	A	A	I	N	Q	Q	L	R	N	F	T	V	V	V	G	D	K	D	V	V	T	G	K	D	I	A	G	L	K	T	E	L	E	Q	K	K	I	N	F	D	Y	Q	E	Y	P	G	L	N	H
Query Conservation
Alig confidence												.	.	.	.	.	.	.	.	.	.	.																					.	.
Template Conservation												.	.	.	.	.	.	.	.	.	.	.																					.	.
Template Sequence		I	A	L	D	A	W	M	F	P	L	.	.	.	.	.	.	.	.	.	.	.	G	D	E	V	Y	S	R	I	P	Q	P	L	F	F	I	N	S	E	Y	F	.	.	Q	Y	P	A	N	I	I	K	M	K	K	C	Y	S	P	D	K	E	R	K	M	I	T	I	R	G	S	V	H
Template Known Secondary structure					S				T	T	S	.	.	.	.	.	.	.	.	.	.	.		T	T	G	G	G				S								S	S	S	.	.												T			T	T	S								T	T			G
Template Predicted Secondary structure												.	.	.	.	.	.	.	.	.	.	.																					.	.
Template SS confidence
		293	.	.	.	.	.	.	300	.	.												.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.			.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions