Job Description P31471 Confidence 99.10% Date Thu Jan 5 11:48:00 GMT 2012 Rank 151 Aligned Residues 130 % Identity 14% Template c3biwD_ PDB info PDB header:cell adhesion/cell adhesion Chain: D: PDB Molecule:neuroligin-1; PDBTitle: crystal structure of the neuroligin-1/neurexin-1beta synaptic adhesion2 complex Resolution 3.50 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		159	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		M	Y	V	W	T	P	P	G	Y	T	G	M	G	E	P	L	P	V	L	Y	F	Y	H	G	F	G	D	T	G	R	S	A	I	D	Q	G	R	I	P	Q	I	M	D	N	L	L	A	E	G	K	I	K	P	M	L	V	V	I	P	D	T	E	T	D	A	K	G	I	I	P	E	D	F	V	P	Q	E	R	R	K
Query Conservation
Alig confidence										.																																				.	.	.	.	.	.	.	.													.	.	.	.	.	.	.	.	.	.
Template Conservation										.																																				.	.	.	.	.	.	.	.													.	.	.	.	.	.	.	.	.	.
Template Sequence		L	N	I	Y	V	P	T	I	.	R	D	S	G	G	P	K	P	V	M	V	Y	I	H	G	G	S	Y	M	E	G	T	G	N	L	Y	D	G	S	V	L	A	S	Y	G	.	.	.	.	.	.	.	.	N	V	I	V	I	T	V	N	Y	R	L	G	.	.	.	.	.	.	.	.	.	.	V	L	G	F	L	S
Template Known Secondary structure										.		S			S											S	S	S	S	S			T	T	T	S										.	.	.	.	.	.	.	.	T												.	.	.	.	.	.	.	.	.	.						B
Template Predicted Secondary structure										.																																				.	.	.	.	.	.	.	.													.	.	.	.	.	.	.	.	.	.
Template SS confidence
		156	.	.	.	160	.	.	.		.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.									.	200	.	.	.	.	.	.	.	.	.	210											.	.	.	.	.	.
		239	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.		.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290				.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.
Predicted Secondary structure																														.																									.	.	.
Query SS confidence																														.																									.	.	.
Query Sequence		V	F	Y	P	L	N	A	K	A	A	D	R	E	L	M	N	D	I	I	P	L	I	S	K	R	F	N	V	.	R	K	D	A	D	G	R	A	L	A	G	L	S	Q	G	G	Y	Q	A	L	V	S	G	M	.	.	.	N	H	L	E	S	F	G	W	L	A	T	F	S	G	V	T	T
Query Conservation																														.																									.	.	.
Alig confidence																														.																									.	.	.
Template Conservation
Template Sequence		T	G	D	Q	A	A	K	G	N	Y	G	L	L	D	L	I	Q	A	L	R	W	T	S	E	N	I	G	F	F	G	G	D	P	L	R	I	T	V	F	G	S	G	A	G	G	S	C	V	N	L	L	T	L	S	H	Y	S	E	K	G	L	F	Q	R	A	I	A	Q	S	G	T	A	L
Template Known Secondary structure			S	S	S	S		B																			G	G	G	G	T												T										T	T	S	T	T	S		T	T	S								T			S	S
Template Predicted Secondary structure
Template SS confidence
		240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions