Job Description P31471 Confidence 97.44% Date Thu Jan 5 11:48:00 GMT 2012 Rank 277 Aligned Residues 79 % Identity 23% Template c2ya1A_ PDB info PDB header:hydrolase Chain: A: PDB Molecule:putative alkaline amylopullulanase; PDBTitle: product complex of a multi-modular glycogen-degrading2 pneumococcal virulence factor spua Resolution 2.25 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		42	.	.	.	.	.		.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.					.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.									.	.	.	.	.	.	.	100	.	.	.	.	.	.
Predicted Secondary structure								.																		.	.	.	.																													.	.	.	.	.	.	.	.															.	.
Query SS confidence								.																		.	.	.	.																													.	.	.	.	.	.	.	.															.	.
Query Sequence		Q	V	N	A	D	N	.	S	V	T	F	R	Y	F	A	P	G	A	K	N	V	S	V	V	.	.	.	.	V	G	V	P	V	P	D	N	I	H	P	M	T	K	D	E	A	G	V	W	S	W	R	T	P	I	L	K	.	.	.	.	.	.	.	.	G	N	L	Y	E	Y	F	F	N	V	D	G	V	R	.	.
Query Conservation								.																		.	.	.	.																													.	.	.	.	.	.	.	.															.	.
Alig confidence								.																		.	.	.	.																													.	.	.	.	.	.	.	.															.	.
Template Conservation
Template Sequence		D	L	K	E	E	G	K	Q	V	D	L	T	L	W	S	P	S	A	D	K	V	S	V	V	V	Y	D	K	N	D	P	D	K	V	V	G	T	V	A	L	E	K	G	E	R	G	T	W	K	Q	T	L	D	S	T	N	K	L	G	I	T	D	F	T	G	Y	Y	Y	Q	Y	Q	I	E	R	Q	G	K	T	V	L
Template Known Secondary structure					G	G	G	T									T	T		S									S	S		T	T	S											G	G	G								T	T		S	S			S			T	T										T	T
Template Predicted Secondary structure
Template SS confidence
		454	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.
		107	.	.	110	.	.	.	.	.	.	.	.	.	120
Predicted Secondary structure
Query SS confidence
Query Sequence		S	I	D	T	G	T	A	M	T	N	P	Q	R	Q
Query Conservation
Alig confidence
Template Conservation
Template Sequence		A	L	D	P	Y	A	K	S	L	A	A	W	N	S
Template Known Secondary structure					T	T		S	S	B				B	G
Template Predicted Secondary structure
Template SS confidence
		534	.	.	.	.	.	540	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions