Return to main results Retrieve Phyre Job Id

Job DescriptionP31471
Confidence99.55%DateThu Jan 5 11:48:00 GMT 2012
Rank102Aligned Residues197
% Identity19%Templatec2y6vB_
PDB info PDB header:hydrolaseChain: B: PDB Molecule:peroxisomal membrane protein lpx1; PDBTitle: peroxisomal alpha-beta-hydrolase lpx1 (yor084w) from2 saccharomyces cerevisiae (crystal form i)
Resolution2.83 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   151........160....... ..170.........180.........190.........200.........210.. .......220..
Predicted Secondary structure 








.





















.......




Query SS confidence 
















.












































. . . . . . .









Query Sequence  NALQSERQMYVWTPPGY. TGMGEPLPVLYFYHGFGDTGRSAIDQGRIPQIMDNLLAEGKIKPM. . . . . . . LVVIPDTETD
Query Conservation     
      

 
  
.      



 



                  
 


       .......


       
Alig confidence 
















.

























..........








.......









Template Conservation    
   
 
  
               





   
   
   ..........
  
             

  

 
 
Template Sequence  ATDRLELTYDVYTSAERRRSRTATRLNLVFLHGSGMSKVVWEYY. . . . . . . . . . LPRLVAADAEGNYAIDKVLLIDQVNH
Template Known Secondary structure 






S




TT


TT

GGGGGGG..........GGGS



TTT

TTS
Template Predicted Secondary structure 






















..........














Template SS confidence 















































































   27..30.........40.........50.........60.........70 .........80.........90......
 
   223......230.........240.........250.........260.........270.........280.........290.........300..
Predicted Secondary structure 






































Query SS confidence 















































































Query Sequence  AKGIIPEDFVPQERRKVFYPLNAKAADRELMNDIIPLISKRFNVRKDADGRALAGLSQGGYQALVSGMNHLESFGWLATF
Query Conservation                               
   
 
 

       
     
 
 
 

  

      

 
      
Alig confidence 















..........





















































Template Conservation 
 
             ..........    
 

   
  
          





 

 

   
   
  
  



Template Sequence  GDSAVRNRGRLGTNFN. . . . . . . . . . WIDGARDVLKIATELGSIDSHPALNVVIGHSMGGFQALACDVLQPNLFHLLILI
Template Known Secondary structure  TTTTB
S


..........




GGG
ST
TTS
S
Template Predicted Secondary structure 















..........















Template SS confidence 















































































   98.100.........110... ......120.........130.........140.........150.........160.......
 
   303......310.
Predicted Secondary structure 








.......................................................................
Query SS confidence 








. . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . .
Query Sequence  SGVTTTTVP. . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . .
Query Conservation 

       .......................................................................
Alig confidence 








.......................................................................
Template Conservation   
                                                                              
Template Sequence  EPVVITRKAIPPDSPQIPENLYNSLRLKTDHFANESEYVKYMRNGSFFTNAHSQILQNIIDFERTKGPVRTKMEQAQNLL
Template Known Secondary structure  S


S





TT




T

SSTSS
TTS



SS
Template Predicted Secondary structure 




























Template SS confidence 















































































   169170.........180.........190.........200.........210.........220.........230.........240........
 
   312.......320.........330.........340.........350.........360.........370.
Predicted Secondary structure  ..





















Query SS confidence  . .



























































Query Sequence  . . DEGVAARLNDPAAINQQLRNFTVVVGDKDVVTGKDIAGLKTELEQKKINFDYQEYPGLNH
Query Conservation  ..                      
  
  
         
   
   
         
 

Alig confidence  ..











































....











Template Conservation                 
  
  




 
  
   
     
    
....
     
  


Template Sequence  CYMNMQTFAPFLISNVKFVRKRTIHIVGARSNWPPQNQLFLQKTLQ. . . . NYHLDVIPGGSH
Template Known Secondary structure  TTS
GGGTTTGGG

STT




S....STT

T
Template Predicted Secondary structure 

















....






Template SS confidence 





























































   265....270.........280.........290.........300.........310 .........320..
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions