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Job DescriptionP31471
Confidence98.93%DateThu Jan 5 11:48:00 GMT 2012
Rank176Aligned Residues192
% Identity18%Templatec2xt0A_
PDB info PDB header:hydrolaseChain: A: PDB Molecule:haloalkane dehalogenase; PDBTitle: dehalogenase dppa from plesiocystis pacifica sir-i
Resolution1.90 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   144.....150.........160.........170.........180.........190.........200.........210.........220...
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Query Sequence  IAITYHSNALQSERQMYVWTPPGYTGMGEPLPVLYFYHGFGDTGRSAIDQGRIPQIMDNLLAEGKIKPMLVVIPDTETDA
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Template Sequence  HYLEGLPGFEGLRMHYVDEGPRD. . . . AE. . HTFLCLHGEPSWSFLY. . . . . . RKMLPVFTAAG. . . . GRVVAPDLFGFG
Template Known Secondary structure 


TT
TT

S
TT....
S..


TT

GGGG......TTTTT....


TTST
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   22.......30.........40.... .. ...50.........60.. .......70... ......80.....
 
   224.....230.........240.........250.........260.........270.........280.........290.........300...
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Query Sequence  KGIIPEDFVPQERRKVFYPLNAKAADRELMNDIIPLISKRFNVRKDADGRALAGLSQGGYQALVSGMNHLESFGWLATFS
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Template Sequence  RSDKPTDDAVYT. . . . . . . . . . . . . FGFHRRSLLAFLDAL. . . . . QLERVTLVCQDWGGILGLTLPVDRPQLVDRLIVMN
Template Known Secondary structure  TS
S
GGG

..................T

S
TT
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   86...90....... ..100.........110.. .......120.........130.........140.......
 
   304.....310. .......
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Query Sequence  GVTTTTVP. . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . DEGVAAR
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Template Conservation                                                                                  
Template Sequence  TALAVGLSPGKGFESWRDFVANSPDLDVGKLMQRAIPGITDAEVAAYDAPFPGPEFKAGVRRFPAIVPITPDMEGAEIGR
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SSS
S
T
TT

STT

TT
SSGGG
GGGGS

STTSTT
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   148.150.........160.........170.........180.........190.........200.........210.........220.......
 
   319320.........330.........340.........350.........360.........370.
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Query Sequence  LNDPAAINQQLRNFTVVVGDKDVVTGKDIAGLKTELEQKKINFDYQEYPGLNH
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Template Sequence  QAMSFWSTQWSGPTFMAVGAQDPVLGPE. . VMGMLRQAIRGCPEPMIVEAGGH
Template Known Secondary structure  T

S
TT
SSSS..STT



TT

S
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   228.230.........240.........250..... ....260.........270........
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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