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Job DescriptionP31471
Confidence99.66%DateThu Jan 5 11:48:00 GMT 2012
Rank87Aligned Residues194
% Identity18%Templatec2qruA_
PDB info PDB header:structural genomics, unknown functionChain: A: PDB Molecule:uncharacterized protein; PDBTitle: crystal structure of an alpha/beta hydrolase superfamily protein from2 enterococcus faecalis
Resolution1.65 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   159160.........170.........180.........190.........200.........210.........220.........230........
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Query Sequence  MYVWTPPGYTGMGEPLPVLYFYHGFGDTGRSAIDQGRIPQIMDNLLAEGKIKPMLVVIPDTETDAKGIIPEDFVPQERRK
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Template Sequence  TVTIYPTT. . . . TEPTNYVVYLHGGG. . . . . . XIYGTKSDLPEELKELFTSNGYTVLALDYLLAPNTK. . . . . . . . . . . .
Template Known Secondary structure 

S....SSS


ST......TTS

GGG

TTT



TTTS
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   14.....20. ........30..... ....40.........50.........60.........70.
 
   239240.........250.........260.........270.........280.........290..... ....300.........310.
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Query Sequence  VFYPLNAKAADRELMNDIIPLISKRFNVRKDADGRALAGLSQGGYQALVSGMNHLES. . . FGWLATFSGVTTTTVP. . . .
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Template Sequence  . . . . . . . . . . IDHILRTLTETFQLLNEEIIQNQSFGLCGRSAGGYLXLQLTKQLQTLNLTPQFLVNFYGYTDLEFIKEPR
Template Known Secondary structure  ..........TTTT

TTT


S
S

S
SGGGGS

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   72.......80.........90.........100.........110.........120.........130.........140.
 
   312.......320.........330.........340..
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Query Sequence  . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . DEGVAARLNDPAAINQQLRNFTVVVGDKDVV
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Template Sequence  KLLKQAISAKEIAAIDQTKPVWDDPFLSRYLLYHYSIQQALLPHFYGLPENGDWSAYALSDETLKTFPPCFSTASSSDEE
Template Known Secondary structure 
S
SS


SGGGTTS

SS

S

TT
TTTT
T

TTS

GGG


TS

TT
SS
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   142.......150.........160.........170.........180.........190.........200.........210.........220.
 
   343......350.........360.........370...... ...380.......
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Query Sequence  TGKDIAGLKTELEQKKINFDYQEYPGLNHEMDVW. . . . . . RPAYAAFVQKL
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Template Sequence  VPF. . . RYSKKIGRTIPESTFKAVYYLEHDFLKQTKDPSVITLFEQLDSWL
Template Known Secondary structure  S
T...STT

S

S
GGGGTTS
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   222.. .....230.........240.........250.........260.........
 
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No model constructed - rank, confidence too low




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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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