Job Description P31471 Confidence 100.00% Date Thu Jan 5 11:48:00 GMT 2012 Rank 23 Aligned Residues 225 % Identity 14% Template c2g5tA_ PDB info PDB header:hydrolase Chain: A: PDB Molecule:dipeptidyl peptidase 4; PDBTitle: crystal structure of human dipeptidyl peptidase iv (dppiv)2 complexed with cyanopyrrolidine (c5-pro-pro) inhibitor 21ag Resolution 2.30 Å

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		143	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.				.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																																															.	.	.
Query SS confidence																																															.	.	.
Query Sequence		L	I	A	I	T	Y	H	S	N	A	L	Q	S	E	R	Q	M	Y	V	W	T	P	P	G	Y	T	G	M	G	E	P	L	P	V	L	Y	F	Y	H	G	F	G	D	T	G	.	.	.	R	S	A	I	D	Q	G	R	I	P	Q	I	M	D	N	L	L	A	E	G	K	I	K	P	M	L	V	V	I	P	D	T
Query Conservation																																															.	.	.
Alig confidence											.																	.																			.	.	.														.	.	.	.	.	.	.	.
Template Conservation											.																	.																																			.	.	.	.	.	.	.	.
Template Sequence		S	K	K	L	D	F	I	I	L	.	N	E	T	K	F	W	Y	Q	M	I	L	P	P	H	F	D	.	K	S	K	K	Y	P	L	L	L	D	V	Y	A	G	P	C	S	Q	K	A	D	T	V	F	R	L	N	W	A	T	Y	L	A	S	.	.	.	.	.	.	.	.	T	E	N	I	I	V	A	S	F	D	G
Template Known Secondary structure											.	T	T											T	T			.	T	T	S												T	T						S					S								.	.	.	.	.	.	.	.	T	T
Template Predicted Secondary structure											.																	.																																			.	.	.	.	.	.	.	.
Template SS confidence
		511	.	.	.	.	.	.	.	.		520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.		.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560	.	.	.	.	.	.	.	.	.									570	.	.	.	.	.	.	.	.	.	580
		220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		E	T	D	A	K	G	I	I	P	E	D	F	V	P	Q	E	R	R	K	V	F	Y	P	L	N	A	K	A	A	D	R	E	L	M	N	D	I	I	P	L	I	S	K	R	F	N	V	R	K	D	A	D	G	R	A	L	A	G	L	S	Q	G	G	Y	Q	A	L	V	S	G	M	N	H	L	E	S	F	G	W	L
Query Conservation
Alig confidence																																					.	.	.	.	.	.	.	.	.	.
Template Conservation																																					.	.	.	.	.	.	.	.	.	.
Template Sequence		R	G	S	G	Y	Q	G	D	K	I	M	H	A	I	N	R	R	L	G	T	F	E	V	E	D	Q	I	E	A	A	R	Q	F	S	K	.	.	.	.	.	.	.	.	.	.	M	G	F	V	D	N	K	R	I	A	I	W	G	W	S	Y	G	G	Y	V	T	S	M	V	L	G	S	G	S	G	V	F	K	C	G
Template Known Secondary structure		T	T		S	S	S						G	G	G	T	T		T	T	S														T	T	.	.	.	.	.	.	.	.	.	.	S	S	S												T											T	S						S
Template Predicted Secondary structure																																					.	.	.	.	.	.	.	.	.	.
Template SS confidence
		581	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.	600	.	.	.	.	.	.	.	.	.	610	.	.	.	.	.											.	.	.	.	620	.	.	.	.	.	.	.	.	.	630	.	.	.	.	.	.	.	.	.	640	.	.	.	.	.	.	.	.	.	650
		300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.																	320	.	.	.	.	.	.	.	.	.		330	.	.	.	.	.	.	.	.	.	340	.	.	.	.		.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.
Predicted Secondary structure																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.											.																.
Query SS confidence																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.											.																.
Query Sequence		A	T	F	S	G	V	T	T	T	T	V	P	D	E	G	V	A	A	R	L	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	N	D	P	A	A	I	N	Q	Q	L	.	R	N	F	T	V	V	V	G	D	K	D	V	V	T	G	.	K	D	I	A	G	L	K	T	E	L	E	Q	K	K	I	N	F
Query Conservation																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.											.																.
Alig confidence																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.											.																.
Template Conservation
Template Sequence		I	A	V	A	P	V	S	R	W	E	Y	Y	D	S	V	Y	T	E	R	Y	M	G	L	P	T	P	E	D	N	L	D	H	Y	R	N	S	T	V	M	S	R	A	E	N	F	K	Q	V	E	Y	L	L	I	H	G	T	A	D	D	N	V	H	F	Q	Q	S	A	Q	I	S	K	A	L	V	D	V	G	V	D	F
Template Known Secondary structure					S					G	G	G	S	B											S	S	T	T	T	T							T		S	G	G	G	G	G	G	G	G	G	S								T	T		S	S	S																T
Template Predicted Secondary structure
Template SS confidence
		651	.	.	.	.	.	.	.	.	660	.	.	.	.	.	.	.	.	.	670	.	.	.	.	.	.	.	.	.	680	.	.	.	.	.	.	.	.	.	690	.	.	.	.	.	.	.	.	.	700	.	.	.	.	.	.	.	.	.	710	.	.	.	.	.	.	.	.	.	720	.	.	.	.	.	.	.	.	.	730
		362	.	.	.	.	.	.	.	370	.	.	.	.				.	.	.	.	.	380	.	.	.	.	.	.	.
Predicted Secondary structure															.	.	.
Query SS confidence															.	.	.
Query Sequence		D	Y	Q	E	Y	P	G	L	N	H	E	M	D	.	.	.	V	W	R	P	A	Y	A	A	F	V	Q	K	L
Query Conservation															.	.	.
Alig confidence															.	.	.
Template Conservation
Template Sequence		Q	A	M	W	Y	T	D	E	D	H	G	I	A	S	S	T	A	H	Q	H	I	Y	T	H	M	S	H	F	I
Template Known Secondary structure							T	T			T	T			S
Template Predicted Secondary structure
Template SS confidence
		731	.	.	.	.	.	.	.	.	740	.	.	.	.	.	.	.	.	.	750	.	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions