Job Description P31471 Confidence 100.00% Date Thu Jan 5 11:48:00 GMT 2012 Rank 12 Aligned Residues 326 % Identity 15% Template c2ecfA_ PDB info PDB header:hydrolase Chain: A: PDB Molecule:dipeptidyl peptidase iv; PDBTitle: crystal structure of dipeptidyl aminopeptidase iv from2 stenotrophomonas maltophilia Resolution 2.80 Å

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		44	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		N	A	D	N	S	V	T	F	R	Y	F	A	P	G	A	K	N	V	S	V	V	V	G	V	P	V	P	D	N	I	H	P	M	T	K	D	E	A	G	V	W	S	W	R	T	P	I	L	K	G	N	L	Y	E	Y	F	F	N	V	D	G	V	R	S	I	D	T	G	T	A	M	T	N	P	Q	R	Q	V	N	S
Query Conservation
Alig confidence																																					.
Template Conservation																																					.
Template Sequence		E	K	A	G	L	A	Y	F	R	A	G	I	E	S	A	R	E	S	Q	I	Y	A	V	P	L	Q	G	G	Q	P	Q	R	L	S	K	.	A	P	G	M	H	S	A	S	F	A	R	N	A	S	V	Y	V	D	S	W	S	N	N	S	T	P	P	Q	I	E	L	F	R	A	N	G	E	K	I	A	T	L	V	E
Template Known Secondary structure		T	T	T	T								S	S		T	T		B							T	T										.	S		S								T	T	S	S									T	T										T	T	S						S	S
Template Predicted Secondary structure																																					.
Template SS confidence
		389	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.		.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.
		124	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.							190	.	.	.	.	.	.	.
Predicted Secondary structure																																																																				.	.	.	.	.	.
Query SS confidence																																																																				.	.	.	.	.	.
Query Sequence		S	M	I	L	V	P	G	S	Y	L	D	T	R	S	V	A	H	G	D	L	I	A	I	T	Y	H	S	N	A	L	Q	S	E	R	Q	M	Y	V	W	T	P	P	G	Y	T	G	M	G	E	P	L	P	V	L	Y	F	Y	H	G	F	G	D	T	G	R	S	.	.	.	.	.	.	A	I	D	Q	G	R	I	P
Query Conservation																																																																				.	.	.	.	.	.
Alig confidence																																															.																					.	.	.	.	.	.
Template Conservation																																															.
Template Sequence		N	D	L	A	D	P	K	H	P	Y	A	R	Y	R	E	A	Q	R	P	V	E	F	G	T	L	T	A	A	D	G	K	T	P	L	N	Y	S	V	I	K	P	A	G	F	D	.	P	A	K	R	Y	P	V	A	V	Y	V	Y	G	G	P	A	S	Q	T	V	T	D	S	W	P	G	R	G	D	H	L	F	N	Q
Template Known Secondary structure				S	S	S	T	T	S	T	T					T	T												T	T	S	S											S	S			.	T	T	S											S	T	T			S		S	S					S
Template Predicted Secondary structure																																															.
Template SS confidence
		468	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.		.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.
		198	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Q	I	M	D	N	L	L	A	E	G	K	I	K	P	M	L	V	V	I	P	D	T	E	T	D	A	K	G	I	I	P	E	D	F	V	P	Q	E	R	R	K	V	F	Y	P	L	N	A	K	A	A	D	R	E	L	M	N	D	I	I	P	L	I	S	K	R	F	N	V	R	K	D	A	D	G	R	A	L	A	G
Query Conservation
Alig confidence							.	.	.	.	.	.	.	.																																														.	.	.	.	.	.	.	.	.	.
Template Conservation							.	.	.	.	.	.	.	.																																														.	.	.	.	.	.	.	.	.	.
Template Sequence		Y	L	A	Q	Q	.	.	.	.	.	.	.	.	G	Y	V	V	F	S	L	D	N	R	G	T	P	R	R	G	R	D	F	G	G	A	L	Y	G	K	Q	G	T	V	E	V	A	D	Q	L	R	G	V	A	W	L	K	Q	Q	.	.	.	.	.	.	.	.	.	.	P	W	V	D	P	A	R	I	G	V	Q	G
Template Known Secondary structure						T	.	.	.	.	.	.	.	.	T									T	T		S	S	S							T	T	T	T		T	T	T															T	S	.	.	.	.	.	.	.	.	.	.	T	T
Template Predicted Secondary structure							.	.	.	.	.	.	.	.																																														.	.	.	.	.	.	.	.	.	.
Template SS confidence
		547	.	.	550	.									.	.	.	.	.	.	.	.	560	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.											.	.	.	600	.	.	.	.	.	.	.	.
		278	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.															.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.
Predicted Secondary structure																																										.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																										.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		L	S	Q	G	G	Y	Q	A	L	V	S	G	M	N	H	L	E	S	F	G	W	L	A	T	F	S	G	V	T	T	T	T	V	P	D	E	G	V	A	A	.	.	.	.	.	.	.	.	.	.	.	.	.	.	R	L	N	D	P	A	A	I	N	Q	Q	L	R	N	F	T	V	V	V	G	D	K	D	V	V	T
Query Conservation																																										.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																																										.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		W	S	N	G	G	Y	M	T	L	M	L	L	A	K	A	S	D	S	Y	A	C	G	V	A	G	A	P	V	T	D	W	G	L	Y	D	S	H	Y	T	E	R	Y	M	D	L	P	A	R	N	D	A	G	Y	R	E	A	R	V	L	T	H	I	E	G	L	R	S	P	L	L	L	I	H	G	M	A	D	D	N	V
Template Known Secondary structure			T														T	T	T		S						S					G	G	G	S	B											T	G	G	G									S	G	G	G	G	G	G			S								T	T		S	S	S
Template Predicted Secondary structure
Template SS confidence
		609	610	.	.	.	.	.	.	.	.	.	620	.	.	.	.	.	.	.	.	.	630	.	.	.	.	.	.	.	.	.	640	.	.	.	.	.	.	.	.	.	650	.	.	.	.	.	.	.	.	.	660	.	.	.	.	.	.	.	.	.	670	.	.	.	.	.	.	.	.	.	680	.	.	.	.	.	.	.	.
		344		.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.						.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.
Predicted Secondary structure			.																														.	.	.	.	.
Query SS confidence			.																														.	.	.	.	.
Query Sequence		G	.	K	D	I	A	G	L	K	T	E	L	E	Q	K	K	I	N	F	D	Y	Q	E	Y	P	G	L	N	H	E	M	.	.	.	.	.	D	V	W	R	P	A	Y	A	A	F	V	Q	K	L	F	K
Query Conservation			.																														.	.	.	.	.
Alig confidence			.																														.	.	.	.	.
Template Conservation
Template Sequence		L	F	T	N	S	T	S	L	M	S	A	L	Q	K	R	G	Q	P	F	E	L	M	T	Y	P	G	A	K	H	G	L	S	G	A	D	A	L	H	R	Y	R	V	A	E	A	F	L	G	R	C	L	K
Template Known Secondary structure			T													T	T									T	T			S	S
Template Predicted Secondary structure
Template SS confidence
		689	690	.	.	.	.	.	.	.	.	.	700	.	.	.	.	.	.	.	.	.	710	.	.	.	.	.	.	.	.	.	720	.	.	.	.	.	.	.	.	.	730	.	.	.	.	.	.	.	.	.	740

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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