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Job DescriptionP31471
Confidence98.85%DateThu Jan 5 11:48:00 GMT 2012
Rank185Aligned Residues182
% Identity21%Templatec1y37A_
PDB info PDB header:hydrolaseChain: A: PDB Molecule:fluoroacetate dehalogenase; PDBTitle: structure of fluoroacetate dehalogenase from burkholderia sp. fa1
Resolution1.50 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   175....180.........190.........200.........210.........220.........230.........240.........250....
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Query Sequence  PVLYFYHGFGDTGRSAIDQGRIPQIMDNLLAEGKIKPMLVVIPDTETDAKGIIPEDFVPQERRKVFYPLNAKAADRELMN
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Template Sequence  PALLLLHGFPQNLHMW. . . . . . ARVAPLL. . . . . ANEYTVVCADLRGYGGSSKPVGAPDHANYS. . . . . . . . . . FRAMAS
Template Known Secondary structure  S

TT

GGGG......TT.....TTTS

TTSTTS





TT
GGGS..........
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   26...30.........40. ....... .50.........60.........70........ .80....
 
   255....260.........270.........280.........290.........300.........310.
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Query Sequence  DIIPLISKRFNVRKDADGRALAGLSQGGYQALVSGMNHLESFGWLATFSGVTTTTVP. . . . . . . . . . . . . . . . . . . . . . .
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Template Sequence  DQRELMRTL. . . . . GFERFHLVGHDRGGRTGHRMALDHPDSVLSLAVLDIIPTYVMFEEVDRFVARAYWHWYFLQQPAPY
Template Known Secondary structure  T.....T
SST
GGGS


T

TTTTS
TT
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   85....90... ......100.........110.........120.........130.........140.........150.........
 
   312.......320.........330......
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Query Sequence  . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . DEGVAARLNDPAAINQQLRNFTVVV
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Template Conservation                                                                            
 
 
 
Template Sequence  PEKVIGADPDTFYEGCLFGWGATGADGFDPEQLEEYRKQWRDPAAIHGSCCDYRAGGTIDFELDHGDLGRQVQCPALVFS
Template Known Secondary structure  S
SSSSTTTT

T
TTTTT

B
S
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   160.........170.........180.........190.........200.........210.........220.........230.........
 
   337..340.........350.........360.........370. ........380.....
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Query Sequence  GDKDVVTGKDIAGLKTELEQKKINFDYQEYPGLNH. . . . . EMDVWRPAYAAFVQ
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Template Conservation 
  
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Template Sequence  GSAGLMHSLF. . EMQVVWAPRLANMRFASLPG. GHFFVDRFPDDTARILREFLS
Template Known Secondary structure  TTSS..
TTTBSSSS.
TT
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   240......... 250.........260......... 270.........280.........290
 
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No model constructed - rank, confidence too low




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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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