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Job DescriptionP31471
Confidence99.39%DateThu Jan 5 11:48:00 GMT 2012
Rank120Aligned Residues180
% Identity21%Templatec1cr6A_
PDB info PDB header:hydrolaseChain: A: PDB Molecule:epoxide hydrolase; PDBTitle: crystal structure of murine soluble epoxide hydrolase2 complexed with cpu inhibitor
Resolution2.80 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   175....180.........190.........200.........210.........220.........230.........240.........250....
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Query Sequence  PVLYFYHGFGDTGRSAIDQGRIPQIMDNLLAEGKIKPMLVVIPDTETDAKGIIPEDFVPQERRKVFYPLNAKAADRELMN
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Template Sequence  PALCLCHGFPESWFSWRYQ. . IPALAQA. . . . . . . . GFRVLAIDMKGYGDSSSPPEIEEYA. . . . . . . . . . . . . MELLCK
Template Known Secondary structure  S

TT

GGGGGGT..T........T


TTSTTS


S
SGGG
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   257..260.........270..... ....280.. .......290.........300....... ..310...
 
   255....260.........270.........280.........290.........300........
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Query Sequence  DIIPLISKRFNVRKDADGRALAGLSQGGYQALVSGMNHLESFGWLATFSGVTTT. . . . . . . . . . . . . . . . . . . . . . . . . .
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Template Sequence  EMVTFLDKL. . . . . GIPQAVFIGHDWAGVMVWNMALFYPERVRAVASLNTPFMPPDPDVSPMKVIRSIPVFNYQLYFQEP
Template Known Secondary structure  .....T
S
T
STTS






TTS

GGGTST
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   314.....320.. .......330.........340.........350.........360.........370.........380........
 
   309310...
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Query Sequence  . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . TVPDE
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Template Conservation                                                                                  
Template Sequence  GVAEAELEKNMSRTFKSFFRASDETGFIAVHKATEIGGILVNTPEDPNLSKITTEEEIEFYIQQFKKTGFRGPLNWYRNT
Template Known Secondary structure  TTS

SS
SS


TTTT
SSTTS
SS



TTS
TT
STTTTT
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   389390.........400.........410.........420.........430.........440.........450.........460........
 
   314.....320.........330.........340.........350.........360.........370. ........380.....
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Query Sequence  GVAARLNDPAAINQQLRNFTVVVGDKDVVTGKDIAGLKTELEQKKINFDYQEYPGLNH. . . . . EMDVWRPAYAAFVQ
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Template Sequence  ERNWKWSCKGLGRKILVPALMVTAEKDIVLRP. . . EMSKNMEKWIPFLKRGHIEDCGHWTQIEKPTEVNQILIKWLQ
Template Known Secondary structure  GGGTT



S
TT
SSS
G...GGGTTGGGTSTT
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S
S
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   469470.........480.........490.........500 .........510.........520.........530.........540..
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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