 |
Job Description | P0AES6 | Confidence | 30.53% | Date | Thu Jan 5 11:24:06 GMT 2012 |
Rank | 97 | Aligned Residues | 24 |
% Identity | 29% | Template | d1tama_ |
SCOP info | Retroviral matrix proteins
| Retroviral matrix proteins
| Immunodeficiency virus matrix proteins
|
Resolution | UNK |
|
  |   |
1 | . | . | . | . | . | . | . | . | 10 | . | . | . | . | . | . | . | . | . | 20 | . | . | . | . |
Predicted Secondary structure |   |
|
|
|
|
|
|  |  |  |  |  |  |
|
|
|  |  |  |  |  |
|
|
|
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
M | S | N | S | Y | D | S | S | S | I | K | V | L | K | G | L | D | A | V | R | K | R | P | G |
Query Conservation |   |
|   |   |   |
|   |   |   |   |
|   |   |
|   |
|
|
|   |
|
|
|
|
|
|
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
|
|
|   |   |
|
|
|   |
|   |   |
|
|   |   |
|
|
|
|
|
|   |
|
Template Sequence |   |
M | G | A | R | A | S | V | L | S | G | G | E | L | D | R | W | E | K | I | R | L | R | P | G |
Template Known Secondary structure |   |
|
| S |
| T | T | S | S | S | S |  |  |  |  |  |  |  |  | S |  |  |
| S | S |
Template Predicted Secondary structure |   |
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
1 | . | . | . | . | . | . | . | . | 10 | . | . | . | . | . | . | . | . | . | 20 | . | . | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|