Job Description P0AES6 Confidence 100.00% Date Thu Jan 5 11:24:06 GMT 2012 Rank 17 Aligned Residues 139 % Identity 35% Template c3qx3B_ PDB info PDB header:isomerase/dna/isomerase inhibitor Chain: B: PDB Molecule:dna topoisomerase 2-beta; PDBTitle: human topoisomerase iibeta in complex with dna and etoposide Resolution 2.16 Å

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		399	400	.	.	.	.	.	.	.	.	.	410	.				.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.				.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.
Predicted Secondary structure															.	.	.																											.	.	.
Query SS confidence															.	.	.																											.	.	.
Query Sequence		D	L	A	G	L	P	G	K	L	A	D	C	Q	.	.	.	E	R	D	P	A	L	S	E	L	Y	L	V	E	G	D	S	A	G	G	S	A	K	Q	G	R	N	.	.	.	R	K	N	Q	A	I	L	P	L	K	G	K	I	L	N	V	E	K	A	R	F	D	K	M	L	S	S	Q	E	V	A	T	L	I	T
Query Conservation															.	.	.																											.	.	.
Alig confidence								.							.	.	.																											.	.	.
Template Conservation								.
Template Sequence		K	I	K	G	I	P	.	K	L	D	D	A	N	D	A	G	G	K	H	S	L	E	C	T	L	I	L	T	E	G	D	S	A	K	S	L	A	V	S	G	L	G	V	I	G	R	D	R	Y	G	V	F	P	L	R	G	K	I	L	N	V	R	E	A	S	H	K	Q	I	M	E	N	A	E	I	N	N	I	I	K
Template Known Secondary structure					S		T	.	T		B			T	T	T	T	S	T	T	G	G	G								S																T	T	T								S	S					T	T								T
Template Predicted Secondary structure								.
Template SS confidence
		450	.	.	.	.	.		.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.
		473	.	.	.	.	.	.	480	.	.				.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.
Predicted Secondary structure												.	.	.
Query SS confidence												.	.	.
Query Sequence		A	L	G	C	G	I	G	R	D	E	.	.	.	Y	N	P	D	K	L	R	Y	H	S	I	I	I	M	T	D	A	D	V	D	G	S	H	I	R	T	L	L	L	T	F	F	Y	R	Q	M	P	E	I	V	E	R	G	H	V	Y	I	A	Q	P	P	L	Y	K	V	K
Query Conservation												.	.	.
Alig confidence												.	.	.
Template Conservation
Template Sequence		I	V	G	L	Q	Y	K	K	S	Y	D	D	A	E	S	L	K	T	L	R	Y	G	K	I	M	I	M	T	D	Q	D	Q	D	G	S	H	I	K	G	L	L	I	N	F	I	H	H	N	W	P	S	L	L	K	H	G	F	L	E	E	F	I	T	P	A	K	E	A	K
Template Known Secondary structure				T			T	T					S	S	S	G	G	G	G		S		S								S	S																								T
Template Predicted Secondary structure
Template SS confidence
		529	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions