Job Description P0AES6 Confidence 100.00% Date Thu Jan 5 11:24:06 GMT 2012 Rank 2 Aligned Residues 342 % Identity 36% Template c3lnuA_ PDB info PDB header:isomerase Chain: A: PDB Molecule:topoisomerase iv subunit b; PDBTitle: crystal structure of pare subunit Resolution 2.20 Å

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		15	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	L	D	A	V	R	K	R	P	G	M	Y	I	G	D	T	D	D	G	T	G	L	H	H	M	V	F	E	V	V	D	N	A	I	D	E	A	L	A	G	H	C	K	E	I	I	V	T	I	H	A	D	N	S	V	S	V	Q	D	D	G	R	G	I	P	T	G	I	H	P	E	E	G	V	S	A	A	E	V	I
Query Conservation
Alig confidence																		.	.	.	.
Template Conservation																		.	.	.	.
Template Sequence		G	L	D	P	V	K	R	R	P	G	M	Y	T	D	T	A	.	.	.	.	R	P	N	H	L	A	Q	E	V	I	D	N	S	V	D	E	A	L	A	G	H	A	K	Q	I	E	V	T	L	Y	K	D	G	S	C	E	V	S	D	D	G	R	G	M	P	V	D	I	H	P	E	E	K	I	P	G	V	E	L	I
Template Known Secondary structure										G	G	G	T	S		T	T	.	.	.	.	S	T																	T	T	S										T	T	S								S	S					S	B		T	T	T		S	B
Template Predicted Secondary structure																		.	.	.	.
Template SS confidence
		59	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.					.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.
		95	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.			.	.	.	.	.	.	.	.	170	.	.
Predicted Secondary structure																																																																					.	.
Query SS confidence																																																																					.	.
Query Sequence		M	T	V	L	H	A	G	G	K	F	D	D	N	S	Y	K	V	S	G	G	L	H	G	V	G	V	S	V	V	N	A	L	S	Q	K	L	E	L	V	I	Q	R	E	G	K	I	H	R	Q	I	Y	E	H	G	V	P	Q	A	P	L	A	V	T	G	E	T	E	.	.	K	T	G	T	M	V	R	F	W	P	S
Query Conservation																																																																					.	.
Alig confidence				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																														.	.
Template Conservation				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		L	T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	R	L	G	V	S	V	V	N	A	L	S	T	K	V	E	L	F	I	K	R	E	G	S	E	H	R	M	E	F	R	D	G	N	A	A	S	K	L	E	V	V	G	T	V	G	K	K	N	T	G	T	R	L	R	F	W	A	D
Template Known Secondary structure				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.										T											T	T									T	T				S										T	T
Template Predicted Secondary structure				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		135	.																					.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.
		173	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	E	T	F	T	N	V	T	E	F	E	Y	E	I	L	A	K	R	L	R	E	L	S	F	L	N	S	G	V	S	I	R	L	R	D	K	R	D	G	K	E	D	H	F	H	Y	E	G	G	I	K	A	F	V	E	Y	L	N	K	N	K	T	P	I	H	P	N	I	F	Y	F	S	T	E	K	D	G	I	G	V
Query Conservation
Alig confidence							.
Template Conservation							.
Template Sequence		P	K	Y	F	D	.	T	P	K	F	N	V	R	A	L	R	H	L	L	R	A	K	A	V	L	C	P	G	L	T	V	K	L	H	D	E	A	T	G	E	Q	D	S	W	Y	F	E	N	G	L	R	D	Y	L	K	G	E	M	A	E	H	E	M	L	P	A	D	L	F	V	G	S	L	K	K	D	T	E	I	V
Template Known Secondary structure		G	G	G	S	S	.		S																		S	T	T								T	T	T									S	S	S									T	T	T	S															S	S
Template Predicted Secondary structure							.
Template SS confidence
		215	.	.	.	.		220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.
		253	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		E	V	A	L	Q	W	N	D	G	F	Q	E	N	I	Y	C	F	T	N	N	I	P	Q	R	D	G	G	T	H	L	A	G	F	R	A	A	M	T	R	T	L	N	A	Y	M	D	K	E	G	Y	S	K	K	A	K	V	S	A	T	G	D	D	A	R	E	G	L	I	A	V	V	S	V	K	V	P	D	P	K	F
Query Conservation
Alig confidence																																																							.
Template Conservation																																																							.
Template Sequence		D	W	A	A	G	W	V	P	E	G	E	L	V	Q	E	S	Y	V	N	L	I	P	T	A	Q	H	G	T	H	V	N	G	L	R	S	G	L	T	D	A	L	R	E	F	C	D	F	R	N	L	L	P	R	.	G	V	K	L	A	P	E	D	V	W	D	R	V	T	F	V	L	S	L	K	M	T	D	P	Q	F
Template Known Secondary structure									S	S	S									T	T				T	T		B																					T	T				T	.	T										T	T										S	S
Template Predicted Secondary structure																																																							.
Template SS confidence
		294	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.		.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.
		333	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		S	S	Q	T	K	D	K	L	V	S	S	E	V	K	S	A	V	E	Q	Q	M	N	E	L	L	A	E	Y	L	L	E	N	P	T	D	A	K	I	V	V	G	K	I	I	D	A	A	R	A	R
Query Conservation
Alig confidence
Template Conservation
Template Sequence		S	G	Q	T	K	E	R	L	S	S	R	Q	A	A	G	F	I	E	G	A	A	H	D	A	F	S	L	Y	L	N	Q	N	V	E	I	G	E	K	I	A	Q	I	A	I	D	R	A	S	A	R
Template Known Secondary structure			S	T	T	S																																												T
Template Predicted Secondary structure
Template SS confidence
		373	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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