Job Description P0AES6 Confidence 100.00% Date Thu Jan 5 11:24:06 GMT 2012 Rank 7 Aligned Residues 307 % Identity 31% Template c3cwvB_ PDB info PDB header:isomerase Chain: B: PDB Molecule:dna gyrase, b subunit, truncated; PDBTitle: crystal structure of b-subunit of the dna gyrase from myxococcus2 xanthus Resolution 1.95 Å

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		16	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	D	A	V	R	K	R	P	G	M	Y	I	G	D	T	D	D	G	T	G	L	H	H	M	V	F	E	V	V	D	N	A	I	D	E	A	L	A	G	H	C	K	E	I	I	V	T	I	H	A	D	N	S	V	S	V	Q	D	D	G	R	G	I	P	T	G	I	H	P	E	E	G	V	S	A	A	E	V	I	M
Query Conservation
Alig confidence																			.																																															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																			.																																															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		V	E	N	V	R	K	R	P	G	M	Y	C	G	D	V	G	E	.	Y	G	L	H	H	L	V	Y	F	L	L	D	V	A	Y	E	E	A	R	R	G	E	C	R	D	V	V	L	E	V	G	G	D	G	S	I	A	L	F	C	T	S	S	M	L	V	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Known Secondary structure								S						S		S	S		.																				T	T											T	T	S													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																			.																																															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		11	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.		.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.
		96	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		T	V	L	H	A	G	G	K	F	D	D	N	S	Y	K	V	S	G	G	L	H	G	V	G	V	S	V	V	N	A	L	S	Q	K	L	E	L	V	I	Q	R	E	G	K	I	H	R	Q	I	Y	E	H	G	V	P	Q	A	P	L	A	V	T	G	E	T	E	K	T	G	T	M	V	R	F	W	P	S	L	E	T
Query Conservation
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.														.																			.
Template Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.														.																			.
Template Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	V	S	L	A	L	S	S	R	Y	Q	V	D	I	.	W	D	G	R	Q	W	R	V	M	G	E	H	G	H	P	Q	G	M	.	E	P	M	P	V	S	A	E	R	G	V	R	V	H	F	V	P	D	A	T	I
Template Known Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.					T									.				S								T	T						.				S	S			S	S										T	T	T
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.														.																			.
Template SS confidence
																												103	.	.	.	.	.	.	110	.	.	.	.	.		.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.		.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.
		176	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		F	T	N	V	T	E	F	E	Y	E	I	L	A	K	R	L	R	E	L	S	F	L	N	S	G	V	S	I	R	L	R	D	K	R	D	G	K	E	D	H	F	H	Y	E	G	G	I	K	A	F	V	E	Y	L	N	K	N	K	T	P	I	H	P	N	I	F	Y	F	S	T	E	K	D	G	I	G	V	E	V	A
Query Conservation
Alig confidence				.
Template Conservation				.
Template Sequence		F	E	.	V	L	A	F	D	R	A	R	L	S	R	R	C	N	E	L	A	A	L	A	P	G	L	R	V	S	F	A	D	L	Q	R	G	E	R	T	L	W	H	L	P	G	G	V	A	Q	W	A	H	V	L	T	E	A	R	P	Q	L	H	P	E	P	V	V	F	D	F	T	W	D	G	L	R	V	Q	C	A
Template Known Secondary structure			S	.																				S	T	T								T	T	T	T								T	T											T	T	S		B	S	S	S	S									T	T
Template Predicted Secondary structure				.
Template SS confidence
		163	.		.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.
		256	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.			.	.
Predicted Secondary structure																																																																														.	.
Query SS confidence																																																																														.	.
Query Sequence		L	Q	W	N	D	G	F	Q	E	N	I	Y	C	F	T	N	N	I	P	Q	R	D	G	G	T	H	L	A	G	F	R	A	A	M	T	R	T	L	N	A	Y	M	D	K	E	G	Y	S	K	K	A	K	V	S	A	T	G	D	D	A	R	E	G	L	I	A	V	V	S	V	K	V	P	D	P	K	.	.	F	S
Query Conservation																																																																														.	.
Alig confidence																																												.	.	.	.	.	.																													.	.
Template Conservation																																												.	.	.	.	.	.
Template Sequence		L	Q	W	C	E	D	E	D	S	T	L	L	S	F	A	N	A	V	R	T	V	R	H	G	A	H	V	K	G	V	T	Q	A	L	R	G	A	L	A	K	L	S	.	.	.	.	.	.	G	E	T	R	G	A	F	P	W	A	R	V	A	Q	G	L	T	A	I	V	A	V	S	G	P	R	R	Q	M	A	F	A
Template Known Secondary structure					B	S	S	S									T	T				T	T		B																			.	.	.	.	.	.	T			G	G	G	S						T	T	T											G	G	G			B	S
Template Predicted Secondary structure																																												.	.	.	.	.	.
Template SS confidence
		242	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.							.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.
		334	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		S	Q	T	K	D	K	L	V	S	S	E	V	K	S	A	V	E	Q	Q	M	N	E	L	L	A	E	Y	L	L	E	N	P	T	D	A	K	I	V	V	G	K
Query Conservation
Alig confidence
Template Conservation
Template Sequence		G	P	T	K	E	L	L	A	I	P	G	L	E	E	A	I	R	K	Q	L	Q	P	L	F	I	E	L	L	R	E	H	P	V	T	P	A	L	L	A	R	R
Template Known Secondary structure		S	S	S	T	T	S	B			T	T																		T	T		T	T						T	T
Template Predicted Secondary structure
Template SS confidence
		316	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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