Job Description P0AES6 Confidence 20.42% Date Thu Jan 5 11:24:06 GMT 2012 Rank 116 Aligned Residues 47 % Identity 23% Template c1zc1A_ PDB info PDB header:protein turnover Chain: A: PDB Molecule:ubiquitin fusion degradation protein 1; PDBTitle: ufd1 exhibits the aaa-atpase fold with two distinct2 ubiquitin interaction sites Resolution UNK

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		162	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200			.	.	.	.	.	.	.	.	.
Predicted Secondary structure																																									.	.
Query SS confidence																																									.	.
Query Sequence		K	T	G	T	M	V	R	F	W	P	S	L	E	T	F	T	N	V	T	E	F	E	Y	E	I	L	A	K	R	L	R	E	L	S	F	L	N	S	G	.	.	V	S	I	R	L	R	D	K	R
Query Conservation																																									.	.
Alig confidence																				.																					.	.
Template Conservation																				.
Template Sequence		P	L	G	Q	F	V	K	L	E	P	Q	S	V	D	F	L	D	I	.	S	D	P	K	A	V	L	E	N	V	L	R	N	F	S	T	L	T	V	D	D	V	I	E	I	S	Y	N	G	K	T
Template Known Secondary structure					S													T	S	.	S														S				S	S	S							T	T
Template Predicted Secondary structure																				.
Template SS confidence
		120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.		.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions