 |
Job Description | P0AES6 | Confidence | 97.81% | Date | Thu Jan 5 11:24:06 GMT 2012 |
Rank | 52 | Aligned Residues | 68 |
% Identity | 22% | Template | c1gjvA_ |
PDB info |
PDB header:transferase | Chain: A: PDB Molecule:[3-methyl-2-oxobutanoate dehydrogenase |
PDBTitle: branched-chain alpha-ketoacid dehydrogenase kinase (bck)2 complxed with atp-gamma-s
|
Resolution | 2.7 Å |
|
 |
  |   |
36 | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | |
|
|
|
|
|
. | 60 | . | . | . | . | . | . | . | |
|
|
. | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . |
Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|  | . | . | . | . | . | . |  |  |  |  |  |
|
|
|
| . | . | . |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
. |
. |
|
|
|
|
|
|
|
|
| . |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
L | H | H | M | V | F | E | V | V | D | N | A | I | D | E | A | L | A | G | H | C | K | E | . |
. |
. |
. |
. |
. |
I | I | V | T | I | H | A | D | N | . |
. |
. |
S | V | S | V | Q | D | D | G | R | G | I | P | T | G | I | H | P | E | E | G | V | S | A | A | E | V | I | M | T | V | L | H | A | G | G | K | F | D | D |
Query Conservation |   |
|   |
|
|
|   |
|
|
|
|
|
|
|
|
|   |   |   |
|   |   |   |   | . | . | . | . | . | . |
|   |
|   |
|   |   |
|
| . | . | . |
|
|
|
|   |
|
|
|
|
|
|
|
|   |   |
|   |   |   |   |   |   |   |   |
|   |
|
|
|   |
|   |
|
|
|
|
|
|   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . |
|
|
|
|
|
|
|
|
| . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . | . |
|
|
|
|
|
| . | . | . | . | . | . | . | . | . | . | . |
Template Conservation |   |
|   |   |
|
|   |
|
|
|   |
|
|
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |
|   |   |   |   |   |   |   |   |
|   |
|   |
|   |
|
|
|   |
|
|   |   |
| . | . | . | . | . | . | . | . |   |   |   |   |
|
| . | . | . | . | . | . | . | . | . | . | . |
Template Sequence |   |
L | D | Y | I | L | P | E | L | L | K | N | A | M | R | A | T | M | E | S | H | L | D | T | P | Y | N | V | P | D | V | V | I | T | I | A | N | N | D | V | D | L | I | I | R | I | S | D | R | G | G | G | I | A | H | K | . |
. |
. |
. |
. |
. |
. |
. |
D | L | D | R | V | M | . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
Template Known Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | T |
| T | T |
| T | T | S |
|
|
|  |  |  |  |  |  |  |
| S | S |  |  |  |  |  |  |  |
|
| S |
|
|
|
| G | G | . | . | . | . | . | . | . | . | G | T | T | T | T | T | . | . | . | . | . | . | . | . | . | . | . |
Template Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |
|
|  |  |  |  |  |  |  |  |
|
|
|
|
|
|  |  | . | . | . | . | . | . | . | . |  |  |  |  |  |
| . | . | . | . | . | . | . | . | . | . | . |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
239 | 240 | . | . | . | . | . | . | . | . | . | 250 | . | . | . | . | . | . | . | . | . | 260 | . | . | . | . | . | . | . | . | . | 270 | . | . | . | . | . | . | . | . | . | 280 | . | . | . | . | . | . | . | . | . | 290 | . | . | . | |
|
|
|
|
|
|
|
. | . | . | . | . | . | |
|
|
|
|
|
|
|
|
|
|
  |
  |   |
107 | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . |
Predicted Secondary structure |   |
|
|
|  |  |  |  |  |
|
|
|  |  |  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
N | S | Y | K | V | S | G | G | L | H | G | V | G | V | S | V | V |
Query Conservation |   |
  |   |
|
|   |
|
|
|
|
|
|
|
|
|
|
|
|
Alig confidence |   |
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
Template Conservation |   |
  |   |   |   |
|
|   |
| . |   |
|
|
|
|   |   |   |
Template Sequence |   |
D | Y | H | F | T | T | A | G | . |
F | G | F | G | L | P | T | S |
Template Known Secondary structure |   |
S | T | T |
|
|
|
|
| . |
| S |
|  |  |  |  |  |
Template Predicted Secondary structure |   |
|
|
|
|
|
|
|
| . |
|
|  |  |  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
300 | . | . | . | . | . | . | . | |
. | . | 310 | . | . | . | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|