Job Description P0AES6 Confidence 99.09% Date Thu Jan 5 11:24:06 GMT 2012 Rank 37 Aligned Residues 137 % Identity 24% Template c1ea6A_ PDB info PDB header:dna repair Chain: A: PDB Molecule:pms1 protein homolog 2; PDBTitle: n-terminal 40kda fragment of nhpms2 complexed with adp Resolution 2.7 Å

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		36	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.			.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.
Predicted Secondary structure																																		.	.
Query SS confidence																																		.	.
Query Sequence		L	H	H	M	V	F	E	V	V	D	N	A	I	D	E	A	L	A	G	H	C	K	E	I	I	V	T	I	H	A	D	N	.	.	S	V	S	V	Q	D	D	G	R	G	I	P	T	G	I	H	P	E	E	G	V	S	A	A	E	V	I	M	T	V	L	H	A	G	G	K	F	D	D	N	S	Y	K	V	S	G
Query Conservation																																		.	.
Alig confidence																.	.	.			.													.	.																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																.	.	.			.																																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		L	S	T	A	V	K	E	L	V	E	N	S	L	D	.	.	.	A	G	.	A	T	N	I	D	L	K	L	K	D	Y	G	V	D	L	I	E	V	S	D	N	G	C	G	V	E	E	E	N	F	E	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Known Secondary structure																.	.	.	T	T	.		S								T	T	T	T	S								S					T	T	S	T	T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																.	.	.			.																																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		35	.	.	.	.	40	.	.	.	.	.	.	.	.				.	50		.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.
		114	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140			.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170							.	.	.	.	.		.	.	.	.	180	.	.	.	.
Predicted Secondary structure																													.	.																															.	.	.	.	.	.						.
Query SS confidence																													.	.																															.	.	.	.	.	.						.
Query Sequence		G	L	H	G	V	G	V	S	V	V	N	A	L	S	Q	K	L	E	L	V	I	Q	R	E	G	K	I	.	.	H	R	Q	I	Y	E	H	G	V	P	Q	A	P	L	A	V	T	G	E	T	E	K	T	G	T	M	V	R	F	W	.	.	.	.	.	.	P	S	L	E	T	.	F	T	N	V	T	E	F	E	Y
Query Conservation																													.	.																															.	.	.	.	.	.						.
Alig confidence																	.												.	.																			.	.											.	.	.	.	.	.						.
Template Conservation																	.																																.	.
Template Sequence		G	L	T	L	E	A	L	S	S	L	C	A	L	S	D	.	V	T	I	S	T	C	H	A	S	A	K	V	G	T	R	L	M	F	D	H	N	G	K	I	I	Q	K	T	P	Y	P	.	.	R	P	R	G	T	T	V	S	V	Q	Q	L	F	S	T	L	P	V	R	H	K	E	F	Q	R	N	I	K	K	E	Y
Template Known Secondary structure		T	T	T											S		.								T	T		S	S								T	T	S										.	.			S								S	T	T	T	T	S
Template Predicted Secondary structure																	.																																.	.
Template SS confidence
		82	.	.	.	.	.	.	.	90	.	.	.	.	.	.		.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.			.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.
		185	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		E	I	L	A	K	R	L	R	E	L	S	F	L	N	S	G	V	S	I	R	L	R	D	K
Query Conservation
Alig confidence
Template Conservation
Template Sequence		A	K	M	V	Q	V	L	H	A	Y	C	I	I	S	A	G	I	R	V	S	C	T	N	Q
Template Known Secondary structure																T	T
Template Predicted Secondary structure
Template SS confidence
		182	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions