Return to main results Retrieve Phyre Job Id

Job DescriptionP0A996
Confidence99.43%DateThu Jan 5 11:09:41 GMT 2012
Rank2Aligned Residues82
% Identity24%Templatec2h89B_
PDB info PDB header:oxidoreductaseChain: B: PDB Molecule:succinate dehydrogenase ip subunit; PDBTitle: avian respiratory complex ii with malonate bound
Resolution2.40 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   6...10.........20.........30.........40.........50. ........60.........70.....
Predicted Secondary structure 


















..........













Query SS confidence 













































. . . . . . . . . .























Query Sequence  FENCIKCTVCTTACPVSRVNPGYPGPKQAGPDGERLRLKDGALYDE. . . . . . . . . . ALKYCINCKRCEVACPSDVKIGDI
Query Conservation     

 

 
   

                      
       
..........    

 
  
   

 


   
Alig confidence 













































..........























Template Conservation     

 

 
   

          

       
   
 

     

       
   
  

 
  


 

     
Template Sequence  LYECILCACCSTSCPSYWWNGDKYLGPAVLMQAYRWMIDSRDDYTEERLAQLQDPFSLYRCHTIMNCTRTCPKGLNPGKA
Template Known Secondary structure  TTT




TTGGG
TTT


S
TT
S
TT
STTTTTT





TT


Template Predicted Secondary structure 

















































Template SS confidence 















































































   155....160.........170.........180.........190.........200.........210.........220.........230....
 
   76...80.......
Predicted Secondary structure 

Query SS confidence 











Query Sequence  IQRARAKYDTTR
Query Conservation 
   
       
Alig confidence 











Template Conservation 
  

      
Template Sequence  IAEIKKMMATYK
Template Known Secondary structure 

Template Predicted Secondary structure 
Template SS confidence 











   235....240......
 
Download:Text version FASTA pairwise alignment 3D Model in PDB format

View in Jmol

Send structure to FirstGlance for more viewing options


Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions