Return to main results Retrieve Phyre Job Id

Job DescriptionP0A996
Confidence76.64%DateThu Jan 5 11:09:41 GMT 2012
Rank69Aligned Residues163
% Identity12%Templatec1zuwA_
PDB info PDB header:isomeraseChain: A: PDB Molecule:glutamate racemase 1; PDBTitle: crystal structure of b.subtilis glutamate racemase (race) with d-glu
Resolution1.75 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   216...220......... 230.........240.........250.........260.........270.........280.........290....
Predicted Secondary structure  .



















Query SS confidence 













.
































































Query Sequence  RKQAITNVESIREA. VGVKGIPVIATSSTCTFALRDEYPEVLNVDNKGLRDHIELATRWLWRKLDEGKTLPLKPLPLKVV
Query Conservation                .       

  
  
   
                  
    
 
                  
 
Alig confidence 













.










































.............








Template Conservation    
          


  
 
 








   
  

    







     
 .............       

Template Sequence  EEVLQYTWELTNYLLENHHIKMLVIACNTATAIALDDIQRSVGIPVVGVIQPGARAAI. . . . . . . . . . . . . KVTDNQHIG
Template Known Secondary structure  S

S


SS
S.............
SSS
Template Predicted Secondary structure 















.............




Template SS confidence 















































































   48.50.........60.........70.........80.........90.........100..... ....110....
 
   295....300.........310.........320.........330.........340.........350.........360......... 370.
Predicted Secondary structure 



































...
Query SS confidence 










































































. . .

Query Sequence  YHTPCHMEKMGWTLYTLELLRNIPGLELTVLDSQCCGIAGTYGFKKENYPTSQAIGAPLFRQIEESGADLVVTDC. . . ET
Query Conservation   
 

  
           
    
         


 

           
              

  


 
...  
Alig confidence 



















....


















































...

Template Conservation 



  

 
  
   
   ....     
       

  

 
          
   
  
   
 
 






 
 
Template Sequence  VIGTENTIKSNAYEEALLAL. . . . NPDLKVENLACPLLVPFVESGKFLDQTADEIVKTSLYPLKDTSIDSLILGCTHYPI
Template Known Secondary structure 
TT....
TT

TTTS



S

SSTTGGG
Template Predicted Secondary structure 




....





















Template SS confidence 















































































   115....120.........130.... .....140.........150.........160.........170.........180.........190
 
   372.......380. ........390.....
Predicted Secondary structure 


..



Query SS confidence 









. .













Query Sequence  CKWQIEMSTS. . LRCEHPITLLAQAL
Query Conservation 
   
     ..  
 
  


  

Alig confidence 









..













Template Conservation 
   
       
 



   

   
Template Sequence  LKEAIQRYMGEHVNIISSGDETAREV
Template Known Secondary structure  G
TTS
Template Predicted Secondary structure 






Template SS confidence 

























   191........200.........210......
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions