Job Description P45508 Confidence 4.03% Date Thu Jan 5 12:02:51 GMT 2012 Rank 73 Aligned Residues 211 % Identity 14% Template d2mpra_ SCOP info Transmembrane beta-barrels Porins Maltoporin-like Resolution 2.40

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		990	.	.	.	.	.	.	.	.	.	1000	.	.	.	.	.	.	.	.	.	1010	.	.	.	.	.	.	.	.	.	1020	.	.	.	.	.	.	.	.	.	1030	.	.	.	.	.	.	.	.	.	1040	.	.	.	.	.	.	.	.	.	1050	.	.	.	.	.	.	.	.	.	1060	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		R	V	I	G	G	D	Y	H	Y	T	A	A	G	Q	L	A	Q	H	E	D	T	S	T	V	Q	L	S	G	D	L	F	S	G	R	W	G	T	D	G	E	W	M	L	G	I	V	G	G	Y	S	D	N	Q	G	D	S	R	S	N	M	T	G	T	R	A	D	N	Q	N	H	G	Y	A	V	G	L	T	S	S	W
Query Conservation
Alig confidence																																																					.	.	.	.	.
Template Conservation																																																					.	.	.	.	.
Template Sequence		T	E	A	G	G	S	Y	T	F	S	S	Q	N	I	Y	D	E	V	K	D	T	A	N	D	V	F	D	V	R	L	A	G	L	Q	T	N	P	D	G	V	L	E	L	G	V	D	Y	G	R	A	N	.	.	.	.	.	T	T	D	G	Y	K	L	A	D	G	A	S	K	D	G	W	M	F	T	A	E	H	T	Q
Template Known Secondary structure													T	T																								T	T														.	.	.	.	.			T	T		B			T	T
Template Predicted Secondary structure																																																					.	.	.	.	.
Template SS confidence
		147	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.						.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.
		1070	.	.	.	.	.	.	.	.	.	1080	.	.	.	.	.	.	.	.	.	1090	.	.	.	.	.	.	.	.	.	1100	.	.	.	.																	.	.	.	.	.	1110	.	.	.	.	.	.	.	.	.	1120	.	.	.	.	.	.	.	.	.	1130	.	.	.
Predicted Secondary structure																																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		F	Q	H	G	N	Q	K	Q	G	A	W	L	D	S	W	L	Q	Y	A	W	F	S	N	D	V	S	E	Q	E	D	G	T	D	H	Y	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	H	S	S	G	I	I	A	S	L	E	A	G	Y	Q	W	L	P	G	R	G	V	V	I	E	P	Q	A	Q	V
Query Conservation																																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence					.	.	.	.	.																												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																												.	.
Template Conservation					.	.	.	.	.																																																																							.	.
Template Sequence		S	M	L	.	.	.	.	.	K	G	Y	N	K	F	V	V	Q	Y	A	T	D	A	M	T	T	Q	G	K	G	Q	A	R	G	S	D	G	S	S	S	F	T	E	K	I	N	Y	A	N	K	V	I	N	N	N	G	N	M	W	R	I	L	D	H	G	A	I	S	L	G	D	K	W	D	L	M	Y	V	G	.	.
Template Known Secondary structure				T	.	.	.	.	.	T												G	G	G	T	T	T		S	S				T	T	T	T																																	T	T	T								.	.
Template Predicted Secondary structure					.	.	.	.	.																																																																							.	.
Template SS confidence
		222	.	.						.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.
		1134	.	.	.	.	.	1140	.	.	.	.	.	.	.	.	.	1150	.	.	.	.	.	.	.	.	.	1160	.	.	.	.	.	.	.	.	.	1170	.	.	.	.	.	.	.	.	.	1180	.	.	.	.	.	.		.	.	.	1190	.	.	.	.	.	.	.	.	.	1200	.	.	.	.	.	.	.	.	.	1210	.	.
Predicted Secondary structure																																																							.
Query SS confidence																																																							.
Query Sequence		I	Y	Q	G	V	Q	Q	D	D	F	T	A	A	N	R	A	R	V	S	Q	S	Q	G	D	D	I	Q	T	R	L	G	L	H	S	E	W	R	T	A	V	H	V	I	P	T	L	D	L	N	Y	Y	H	D	.	P	H	S	T	E	I	E	E	D	G	S	T	I	S	D	D	A	V	K	Q	R	G	E	I	K	V
Query Conservation																																																							.
Alig confidence											.	.	.	.	.	.	.	.	.	.	.	.																																	.															.	.	.	.	.
Template Conservation											.	.	.	.	.	.	.	.	.	.	.	.																																																.	.	.	.	.
Template Sequence		M	Y	Q	N	I	D	W	D	N	.	.	.	.	.	.	.	.	.	.	.	.	N	L	G	T	E	W	W	T	V	G	V	R	P	M	Y	K	W	T	P	I	M	S	T	L	L	E	V	G	Y	D	N	V	K	S	Q	Q	T	G	D	R	N	N	Q	Y	K	I	T	.	.	.	.	.	L	A	Q	Q	W	Q	A
Template Known Secondary structure									T	T	.	.	.	.	.	.	.	.	.	.	.	.	S																		T	T															T	T	T											.	.	.	.	.							S
Template Predicted Secondary structure											.	.	.	.	.	.	.	.	.	.	.	.																																																.	.	.	.	.
Template SS confidence
		301	.	.	.	.	.	.	.	.													310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.						.	.	.	360	.	.	.
		1213	.	.	.	.	.	.	1220	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	V	T	G	N	I	S	Q	R	V	S	L	R	G	S	V	A
Query Conservation
Alig confidence
Template Conservation
Template Sequence		G	D	S	I	W	S	R	P	A	I	R	I	F	A	T	Y	A
Template Known Secondary structure		S	S	S	T	T			S
Template Predicted Secondary structure
Template SS confidence
		364	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions