Job Description P45508 Confidence 100.00% Date Thu Jan 5 12:02:51 GMT 2012 Rank 4 Aligned Residues 262 % Identity 12% Template d1uynx_ SCOP info Transmembrane beta-barrels Autotransporter Autotransporter Resolution 2.60

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		963	.	.	.	.	.	.	970	.	.	.	.	.	.	.	.	.	980	.	.	.	.	.	.	.	.	.	990	.	.	.	.	.	.	.	.	.				1000	.	.	.	.	.	.	.	.	.	1010	.	.	.	.	.	.	.	.	.	1020	.	.	.	.	.	.	.	.	.	1030	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																																							.	.	.
Query SS confidence																																							.	.	.
Query Sequence		N	N	L	R	A	A	N	Q	A	F	M	M	E	R	R	D	H	A	G	G	D	G	Q	T	L	N	L	R	V	I	G	G	D	Y	H	Y	T	.	.	.	A	A	G	Q	L	A	Q	H	E	D	T	S	T	V	Q	L	S	G	D	L	F	S	G	R	W	G	T	D	G	E	W	M	L	G	I	V	G	G	Y	S
Query Conservation																																							.	.	.
Alig confidence																																							.	.	.																						.	.	.	.	.
Template Conservation																																																															.	.	.	.	.
Template Sequence		S	T	A	A	H	A	D	M	Q	G	R	R	L	K	A	V	S	D	G	L	D	H	N	G	T	G	L	R	V	I	A	Q	T	Q	Q	D	G	G	T	W	E	Q	G	G	V	E	G	K	M	R	G	S	T	Q	T	V	G	I	A	A	K	.	.	.	.	.	T	G	E	N	T	T	A	A	A	T	L	G	M	G
Template Known Secondary structure																				T	T	T	S			S	S																	S	S																		.	.	.	.	.			T	T
Template Predicted Secondary structure																																																															.	.	.	.	.
Template SS confidence
		793	.	.	.	.	.	.	800	.	.	.	.	.	.	.	.	.	810	.	.	.	.	.	.	.	.	.	820	.	.	.	.	.	.	.	.	.	830	.	.	.	.	.	.	.	.	.	840	.	.	.	.	.	.	.	.	.	850	.	.	.						.	.	.	.	.	.	860	.	.	.	.	.	.	.
		1040	.	.	.	.	.	.	.	.	.	1050	.	.	.	.	.	.	.	.	.	1060	.	.	.	.	.	.	.	.	.	1070	.	.	.	.	.	.	.	.	.	1080	.	.	.	.	.	.	.	.	.	1090	.	.	.	.					.	.	.	.	.	1100	.	.	.	.	.	.	.	.	.	1110	.	.	.	.	.
Predicted Secondary structure																																																									.	.	.	.
Query SS confidence																																																									.	.	.	.
Query Sequence		D	N	Q	G	D	S	R	S	N	M	T	G	T	R	A	D	N	Q	N	H	G	Y	A	V	G	L	T	S	S	W	F	Q	H	G	N	Q	K	Q	G	A	W	L	D	S	W	L	Q	Y	A	W	F	S	N	D	V	.	.	.	.	S	E	Q	E	D	G	T	D	H	Y	H	S	S	G	I	I	A	S	L	E	A
Query Conservation																																																									.	.	.	.
Alig confidence										.	.	.	.	.	.																		.	.	.	.																					.	.	.	.
Template Conservation										.	.	.	.	.	.																		.	.	.	.
Template Sequence		R	S	T	W	S	E	N	S	.	.	.	.	.	.	A	N	A	K	T	D	S	I	S	L	F	A	G	I	R	H	D	.	.	.	.	A	G	D	I	G	Y	L	K	G	L	F	S	Y	G	R	Y	K	N	S	I	S	R	S	T	G	A	D	E	H	A	E	G	S	V	N	G	T	L	M	Q	L	G	A	L	G
Template Known Secondary structure								T	T	.	.	.	.	.	.																		.	.	.	.		T	T	T																					S	S	S
Template Predicted Secondary structure										.	.	.	.	.	.																		.	.	.	.
Template SS confidence
		868	.	870	.	.	.	.	.							.	.	.	.	880	.	.	.	.	.	.	.	.	.	890	.	.					.	.	.	.	.	.	.	900	.	.	.	.	.	.	.	.	.	910	.	.	.	.	.	.	.	.	.	920	.	.	.	.	.	.	.	.	.	930	.	.	.	.	.	.	.
		1116	.	.	.	1120	.	.	.	.	.	.	.	.	.	1130	.	.	.	.	.	.	.	.	.	1140	.	.	.	.	.	.	.	.				.	1150	.	.	.	.	.	.	.	.	.	1160	.	.	.	.	.	.	.	.	.	1170	.	.	.	.	.	.	.	.	.	1180	.	.	.	.	.	.	.	.	.	1190	.	.
Predicted Secondary structure																																			.	.	.
Query SS confidence																																			.	.	.
Query Sequence		G	Y	Q	W	L	P	G	R	G	V	V	I	E	P	Q	A	Q	V	I	Y	Q	G	V	Q	Q	D	D	F	T	A	A	N	R	.	.	.	A	R	V	S	Q	S	Q	G	D	D	I	Q	T	R	L	G	L	H	S	E	W	R	T	A	V	H	V	I	P	T	L	D	L	N	Y	Y	H	D	P	H	S	T	E	I
Query Conservation																																			.	.	.
Alig confidence						.	.	.																											.	.	.																																												.
Template Conservation						.	.	.																																																																									.
Template Sequence		G	V	N	V	.	.	.	P	T	G	D	L	T	V	E	G	G	L	R	Y	D	L	L	K	Q	D	A	F	A	E	K	G	S	A	L	G	W	S	G	N	S	L	T	E	G	T	L	V	G	L	A	G	L	K	L	S	Q	P	L	S	D	K	A	V	L	F	A	T	A	G	V	E	R	D	L	N	G	R	D	.
Template Known Secondary structure						.	.	.																									S		T	T																									S	S	S													S	S				.
Template Predicted Secondary structure						.	.	.																																																																									.
Template SS confidence
		938	.	940	.				.	.	.	.	.	.	.	.	950	.	.	.	.	.	.	.	.	.	960	.	.	.	.	.	.	.	.	.	970	.	.	.	.	.	.	.	.	.	980	.	.	.	.	.	.	.	.	.	990	.	.	.	.	.	.	.	.	.	1000	.	.	.	.	.	.	.	.	.	1010	.	.	.
		1193	.	.	.	.	.	.	1200	.	.	.	.	.	.	.	.	.	1210	.	.	.	.	.	.	.	.	.	1220	.	.	.	.	.	.	.	.	.	1230	.	.	.	.	.	.	.	.	.	1240	.	.	.	.	.	.	.	.	.	1250
Predicted Secondary structure
Query SS confidence
Query Sequence		E	E	D	G	S	T	I	S	D	D	A	V	K	Q	R	G	E	I	K	V	G	V	T	G	N	I	S	Q	R	V	S	L	R	G	S	V	A	W	Q	K	G	S	D	D	F	A	Q	T	A	G	F	L	S	M	T	V	K	W
Query Conservation
Alig confidence		.	.	.	.	.	.																																						.
Template Conservation		.	.	.	.	.	.																																						.
Template Sequence		.	.	.	.	.	.	Y	T	V	T	G	P	H	T	R	L	V	A	G	L	G	A	D	V	E	F	G	N	G	W	N	G	L	A	R	Y	S	Y	A	G	S	K	Q	.	Y	G	N	H	S	G	R	V	G	V	G	Y	R	F
Template Known Secondary structure		.	.	.	.	.	.																						T	T													T	T	.
Template Predicted Secondary structure		.	.	.	.	.	.																																						.
Template SS confidence
								1017	.	.	1020	.	.	.	.	.	.	.	.	.	1030	.	.	.	.	.	.	.	.	.	1040	.	.	.	.	.	.	.	.	.	1050	.	.	.		.	.	.	.	.	.	1060	.	.	.	.	.	.	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions