Job Description P45508 Confidence 94.17% Date Thu Jan 5 12:02:51 GMT 2012 Rank 33 Aligned Residues 145 % Identity 21% Template d1phoa_ SCOP info Transmembrane beta-barrels Porins Porin Resolution 3.00

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		1032	.	.	.	.	.	.	.	1040	.	.	.	.	.	.	.	.	.	1050	.	.	.	.	.	.	.	.	.	1060	.	.	.	.	.	.	.	.	.	1070	.	.	.	.	.	.	.	.	.	1080	.	.	.	.	.	.	.	.	.	1090	.	.	.	.	.	.	.	.	.	1100	.	.	.	.	.	.	.	.	.	1110	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	G	I	V	G	G	Y	S	D	N	Q	G	D	S	R	S	N	M	T	G	T	R	A	D	N	Q	N	H	G	Y	A	V	G	L	T	S	S	W	F	Q	H	G	N	Q	K	Q	G	A	W	L	D	S	W	L	Q	Y	A	W	F	S	N	D	V	S	E	Q	E	D	G	T	D	H	Y	H	S	S	G	I	I	A
Query Conservation
Alig confidence																																								.	.	.	.	.	.	.					.	.																									.	.	.	.	.
Template Conservation																																								.	.	.	.	.	.	.					.	.																									.	.	.	.	.
Template Sequence		F	A	I	S	G	A	Y	T	N	S	D	R	T	N	E	Q	N	L	Q	S	R	G	T	G	K	R	A	E	A	W	A	T	G	L	K	Y	D	A	.	.	.	.	.	.	.	N	N	I	Y	.	.	L	A	T	F	Y	S	E	T	R	K	M	T	P	I	T	G	G	F	A	N	K	T	Q	N	.	.	.	.	.
Template Known Secondary structure															G	G	G	T	T	S	S	S	S		S	S														.	.	.	.	.	.	.	T	T			.	.										S		S			S	S	S	S		S					.	.	.	.	.
Template Predicted Secondary structure																																								.	.	.	.	.	.	.					.	.																									.	.	.	.	.
Template SS confidence
		185	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.								.	.	.	.			.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250
		1112	.	.	.	.	.	.	.	1120	.	.	.	.	.	.	.	.	.	1130	.	.	.	.	.	.	.	.	.	1140	.	.	.	.	.	.	.	.	.	1150	.	.	.	.	.	.	.	.	.	1160	.	.	.	.	.	.	.	.	.	1170	.	.	.	.	.	.	.	.	.	1180	.	.	.	.	.	.	.	.	.	1190	.
Predicted Secondary structure
Query SS confidence
Query Sequence		S	L	E	A	G	Y	Q	W	L	P	G	R	G	V	V	I	E	P	Q	A	Q	V	I	Y	Q	G	V	Q	Q	D	D	F	T	A	A	N	R	A	R	V	S	Q	S	Q	G	D	D	I	Q	T	R	L	G	L	H	S	E	W	R	T	A	V	H	V	I	P	T	L	D	L	N	Y	Y	H	D	P	H	S	T	E
Query Conservation
Alig confidence		.																.	.	.	.																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation		.																.	.	.	.																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		.	F	E	A	V	A	Q	Y	Q	F	D	F	G	L	R	P	.	.	.	.	S	L	G	Y	V	L	S	K	G	K	D	I	E	G	I	G	D	E	D	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Known Secondary structure		.										S	S	S				.	.	.	.											S	B	T	T	T	B				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure		.																.	.	.	.																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
			257	.	.	260	.	.	.	.	.	.	.	.	.	270	.					.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290
		1192	.	.	.	.	.	.	.	1200	.	.	.	.	.	.	.	.	.	1210	.	.	.	.	.	.	.	.	.	1220	.	.	.	.	.	.	.	.	.	1230	.	.	.	.	.	.	.	.	.	1240						.	.	.	.	.	.	.	.	.	1250
Predicted Secondary structure																																																			.	.	.	.	.
Query SS confidence																																																			.	.	.	.	.
Query Sequence		I	E	E	D	G	S	T	I	S	D	D	A	V	K	Q	R	G	E	I	K	V	G	V	T	G	N	I	S	Q	R	V	S	L	R	G	S	V	A	W	Q	K	G	S	D	D	F	A	Q	T	.	.	.	.	.	A	G	F	L	S	M	T	V	K	W
Query Conservation																																																			.	.	.	.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.																																				.	.	.	.	.
Template Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	L	V	N	Y	I	D	V	G	A	T	Y	Y	F	N	K	N	M	S	A	F	V	D	Y	K	I	N	Q	L	D	S	D	N	K	L	N	I	N	N	D	D	I	V	A	V	G	M	T	Y	Q	F
Template Known Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.													S	S	S	S														S	S		T	T
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
																291	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions