Job Description P45508 Confidence 98.91% Date Thu Jan 5 12:02:51 GMT 2012 Rank 14 Aligned Residues 136 % Identity 13% Template c3nb3C_ PDB info PDB header:virus Chain: C: PDB Molecule:outer membrane protein a; PDBTitle: the host outer membrane proteins ompa and ompc are packed at specific2 sites in the shigella phage sf6 virion as structural components Resolution 19.00 Å

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		1073	.	.	.	.	.	.	1080	.	.	.	.	.	.	.	.	.	1090	.	.	.	.	.	.	.	.	.	1100	.	.	.	.	.	.	.	.	.	1110	.	.	.	.	.	.	.	.	.	1120	.	.	.	.	.	.	.	.	.	1130	.	.	.	.	.	.	.	.	.	1140	.	.	.	.	.	.	.	.	.	1150	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	N	Q	K	Q	G	A	W	L	D	S	W	L	Q	Y	A	W	F	S	N	D	V	S	E	Q	E	D	G	T	D	H	Y	H	S	S	G	I	I	A	S	L	E	A	G	Y	Q	W	L	P	G	R	G	V	V	I	E	P	Q	A	Q	V	I	Y	Q	G	V	Q	Q	D	D	F	T	A	A	N	R	A	R	V	S
Query Conservation
Alig confidence																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.													.	.							.	.	.	.														.	.	.	.	.	.	.
Template Conservation																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.													.	.							.	.	.	.														.	.	.	.	.	.	.
Template Sequence		A	P	K	D	N	T	W	Y	T	G	A	K	L	G	W	S	Q	H	E	N	K	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	L	G	A	G	A	F	G	G	Y	Q	V	N	.	.	P	Y	V	G	F	E	.	.	.	.	M	G	Y	D	W	L	G	R	M	P	Y	A	Y	.	.	.	.	.	.	.
Template Known Secondary structure					T	T																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.													.	.	T	T					.	.	.	.														.	.	.	.	.	.	.
Template Predicted Secondary structure																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.													.	.							.	.	.	.														.	.	.	.	.	.	.
Template SS confidence
		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.																.	.	.	.	.	.	.	.	30	.	.	.			.	.	.	.	.	.					40	.	.	.	.	.	.	.	.	.	50	.	.
		1153	.	.	.	.	.	.	1160	.	.	.	.	.	.	.	.	.	1170	.	.	.	.	.	.	.	.	.	1180	.	.	.	.	.	.	.	.	.	1190	.	.	.	.	.	.	.	.	.	1200	.	.	.	.	.	.	.	.	.	1210	.	.	.	.	.	.	.	.	.	1220	.	.	.	.	.	.	.	.	.	1230	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Q	S	Q	G	D	D	I	Q	T	R	L	G	L	H	S	E	W	R	T	A	V	H	V	I	P	T	L	D	L	N	Y	Y	H	D	P	H	S	T	E	I	E	E	D	G	S	T	I	S	D	D	A	V	K	Q	R	G	E	I	K	V	G	V	T	G	N	I	S	Q	R	V	S	L	R	G	S	V	A	W	Q	K
Query Conservation
Alig confidence		.	.	.	.																																.	.	.																																										.
Template Conservation		.	.	.	.																																.	.	.																																										.
Template Sequence		.	.	.	.	K	A	Q	G	V	Q	L	T	A	K	L	G	Y	P	I	T	D	D	L	D	I	Y	T	R	L	G	G	M	V	W	R	.	.	.	A	D	T	Y	S	N	V	Y	G	K	N	H	D	T	G	V	S	P	V	F	A	G	G	V	E	Y	A	I	T	P	E	I	A	T	R	L	E	Y	Q	W	T	.
Template Known Secondary structure		.	.	.	.															S	S	S	S														.	.	.						S	S	S																						T	T											.
Template Predicted Secondary structure		.	.	.	.																																.	.	.																																										.
Template SS confidence
						73	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.				.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.
		1233	.	.	.	.	.	.	1240	.	.	.	.	.	.	.	.	.	1250
Predicted Secondary structure
Query SS confidence
Query Sequence		G	S	D	D	F	A	Q	T	A	G	F	L	S	M	T	V	K	W
Query Conservation
Alig confidence		.	.	.	.	.	.
Template Conservation		.	.	.	.	.	.
Template Sequence		.	.	.	.	.	.	N	G	M	L	S	L	G	V	S	Y	R	F
Template Known Secondary structure		.	.	.	.	.	.
Template Predicted Secondary structure		.	.	.	.	.	.
Template SS confidence
								145	.	.	.	.	150	.	.	.	.	.	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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