 |
Job Description | P45508 | Confidence | 6.76% | Date | Thu Jan 5 12:02:51 GMT 2012 |
Rank | 59 | Aligned Residues | 37 |
% Identity | 19% | Template | c3emoA_ |
PDB info |
PDB header:membrane protein/cell adhesion | Chain: A: PDB Molecule:hia (adhesin); |
PDBTitle: crystal structure of transmembrane hia 973-1098
|
Resolution | 3.00 Å |
|
  |   |
1210 | . | . | . | . | . | . | . | . | |
. | 1220 | . | . | . | . | . | . | . | . | . | 1230 | . | . | . | . | . | . | . | . | . | 1240 | . | . | . | . | . | . | . | . | . | 1250 |
Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  | . |
|
|
|  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
I | K | V | G | V | T | G | N | I | . |
S | Q | R | V | S | L | R | G | S | V | A | W | Q | K | G | S | D | D | F | A | Q | T | A | G | F | L | S | M | T | V | K | W |
Query Conservation |   |
  |   |   |
|   |   |   |   |   | . |   |   |   |   |   |
|   |   |   |   |   |   |   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|
Alig confidence |   |
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
|
|
|
|   |   |   |   |   |   |
|   |   |   |   |   |   |   |   |   |
|   |   |   |   | . | . | . | . |   |   |   |   |   |
|
|
|
|
|
|   |   |
Template Sequence |   |
L | A | I | G | V | S | R | I | S | D | N | G | K | V | I | I | R | L | S | G | T | T | N | S | Q | . |
. |
. |
. |
G | K | T | G | V | A | A | G | V | G | Y | Q | W |
Template Known Secondary structure |   |
 |  |  |  |  |  |  |  |
| T | T | S |
|  |  |  |  |  |  |  |  |  |  | T | T | . | . | . | . | S |
|
|  |  |
|
|  |  |  |  |
|
|
Template Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |  |  |
|
|
| . | . | . | . |
|
|  |  |  |  |  |  |  |  |  |  |
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
1061 | . | . | . | . | . | . | . | . | 1070 | . | . | . | . | . | . | . | . | . | 1080 | . | . | . | . | . | |
|
|
|
. | . | . | . | 1090 | . | . | . | . | . | . | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|