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Job DescriptionP45508
Confidence86.51%DateThu Jan 5 12:02:51 GMT 2012
Rank37Aligned Residues666
% Identity11%Templatec3ak5B_
PDB info PDB header:hydrolaseChain: B: PDB Molecule:hemoglobin-binding protease hbp; PDBTitle: hemoglobin protease (hbp) passenger missing domain-2
Resolution2.20 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   232.......240.........250.........260.........270.........280.........290.........300.... ....
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Query Sequence  TNNTAEGYGGAIYTNSVTAPYLIDISVDDSYSQNGGVLVDENNSAAGYGDGPSSAAGGFMYLGLSEVTFDIAD. . . GKTL
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Template Conservation           
  


      
           
      
  


 
   
  


 
      

      
  



Template Sequence  LEWSFNSSTGAGALTQGTTTYAMHGQQGNDLNAGKNLIFQGQNGQINLKDSVSQGAGSLTFRDNYTVTTSNGSTWTGAGI
Template Known Secondary structure  TTTTTT

BTTBGGG

BSTTSS

TT
SS

SS


SS
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   322.......330.........340.........350.........360.........370.........380.........390.........400.
 
   309310.........320.........330.........340.........350.........360.........370.........380........
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Query Sequence  VIGNTENDGAVDSIAGTGLITKTGSGDLVLNADNNDFTGEMQIENGEVTLGRSNSLMNVGDTHCQDDPQDCYGLTIGSID
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Template Conservation   
    

           
 
 
 


 
 
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Template Sequence  VVDNGVSVNWQVNGVKGDNLHKIGEGTLTVQGTGI. NEGGLKVGDGKVVLNQQADNKGQVQAFSSVNIASGRPTVVLTDE
Template Known Secondary structure 
TT





TT
SSS

B.

S
SS

B

TT

S
S

SS

SST
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   402.......410.........420.........430...... ...440.........450.........460.........470.........480
 
   389390.........400.........410.........420.........430.........440.........450.........460........
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Query Sequence  QYQNQAELNVGSTQQTFVHALTGFQNGTLNIDAGGNVTVNQGSFAGIIEGAGQLTIAQNGSYVLAGAQSMALTGDIVVDD
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Template Conservation         
     



 


   
         

 
 
      
              
                  
Template Sequence  RQVNPDTVSWGYRGGTLDVNGNSLTFHQLKAADYGAVLANNVDKRATITLDYGYLFHGQLKGNLNVDNRLPEGVTGALVM
Template Known Secondary structure  TS

GGG
TT

TT

S


STT
SSS




SS

SS


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   481........490.........500.........510.........520.........530.........540.........550.........560
 
   469470.........480.........490.........500.........510.........520.........530.........540........
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Query Sequence  GAVLSLEGDAADLTALQDDPQSIVLNGGVLDLSDFSTWQSGTSYNDGLEVSGSSGTVIGSQDVVDLAGGDNLHIGGDGKD
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Template Conservation   
     
      
 
   
                                                           
Template Sequence  DGAADISGTFTQENGRLTLQGHPVIHAYNTQSVADKLAASGDHSVLTQPTSFSQEDWENRSFTFDRLSLKNTDFGLGRNA
Template Known Secondary structure 
SSS








TT




SSS

SS
S

S
TT
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   639640.........650.........660.........670.........680.........690.........700.........710........
 
   549550.........560.........570.........580.........590.........600.........610.........620........
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Query Sequence  GVYVVVDASDGQVSLANNNSYLGTTQIASGTLMVSDNSQLGDTHYNRQVIFTDKQQESVMEITSDVDTRSDAAGHGRDIE
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Template Conservation 
  
                                               
                            
Template Sequence  TLNTTIQADNSSVTLGDSRVFIDKNDGQGTAFTLEEGTSVATKDADKSVFNGTVNLDNQSVLNINDIFNGGIQANNSTVN
Template Known Secondary structure  S
STTTTSSS






SGGG

S
SS

S
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   719720.........730.........740.........750.........760.........770.........780.........790........
 
   629630.........640.........650.........660.........670.........680.........690.........700........
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Query Sequence  MRADGEVAVDAGVDTQWGALMADSSGQHQDEGSTLTKTGAGTLELTASGTTQSAVRVEEGTLKGDVADILPYASSLWVGD
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Template Conservation                            
                
            
           
           
Template Sequence  ISSDSAVLGNSTLTSTALNLNKGANALASQSFVSDGPVNISDATLSLNSRPDEVSHTLLPVYDYAGSWNLKGDDARLNVG
Template Known Secondary structure 

S

S
TT

S
SSS
SS
TT


S
B

STT

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   799800.........810.........820.........830.........840.........850.........860.........870........
 
   709710.........720.........730.........740.........750.........760.........770.........780........
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Query Sequence  GATFVTGADQDIQSIDAISSGTIDISDGTVLRLTGQDTSVALNASLFNGDGTLVNATDGVTLTGELNTNLETDSLTYLSN
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Template Conservation        
 

                                      
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Template Sequence  PYSMLSGNINVQDKGTVTLGGEGELSPDLTLQNQMLYSLFNGYRNIWSGSLNAPDA. . . . . . . . . . TVSMTDTQWSMNGN
Template Known Secondary structure  TTSS





B
S


TTTT
SS
..........S
S
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   879880.........890.........900.........910.........920.........930.... .....940........
 
   789790.........800.........810.........820.........830.........840......... 850.........860.......
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Query Sequence  VTVNGNLTNTSGAVSLQNGVAGDTLTVNGDYTGGGTLLLDSELNGDDSVSDQLVMNGNTAG. NTTVVVNSITGIGEPTST
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Template Conservation 

   
  
   
 
        



      


    
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Template Sequence  STAGNMKLNRTIVGFNGGTSPFTTLTTDNLDAVQSAFVMRT. . . . DLNKADKLVINKSATGHDNSIWVNFLKKPSNKDTL
Template Known Secondary structure  S

S
SSS

S
....
SS
B

SS


SSS

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   949950.........960.........970.........980......... 990.........1000.........1010.........1020....
 
   868.870.........880.........890.........900.........910...
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Query Sequence  GIKVVDFAADPTQFQNNAQFSLAGSGYVNMGAYDYTLVEDNNDWYL
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Template Conservation 

 
 

  

   
        
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Template Sequence  DIPLVSAPEATADNLFRASTRVVG. FSDVTPILSVRKEDGKKEWVL
Template Known Secondary structure 

TTS
GGG
SS
BS.SS
TT
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   1025....1030.........1040........ .1050.........1060.........
 
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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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