Job Description P45508 Confidence 6.18% Date Thu Jan 5 12:02:51 GMT 2012 Rank 61 Aligned Residues 138 % Identity 12% Template c2k4tA_ PDB info PDB header:membrane protein,apoptosis Chain: A: PDB Molecule:voltage-dependent anion-selective channel PDBTitle: solution structure of human vdac-1 in ldao micelles Resolution UNK

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		1092	.	.	.	.	.	.	.	1100	.	.	.	.	.	.	.	.	.	1110	.	.	.	.	.	.	.	.	.	1120	.	.	.	.	.	.	.	.	.	1130	.	.	.	.	.	.	.	.	.	1140	.	.	.	.	.	.	.	.	.	1150	.	.	.	.	.	.	.	.	.	1160	.	.	.	.	.	.	.	.	.	1170	.
Predicted Secondary structure
Query SS confidence
Query Sequence		N	D	V	S	E	Q	E	D	G	T	D	H	Y	H	S	S	G	I	I	A	S	L	E	A	G	Y	Q	W	L	P	G	R	G	V	V	I	E	P	Q	A	Q	V	I	Y	Q	G	V	Q	Q	D	D	F	T	A	A	N	R	A	R	V	S	Q	S	Q	G	D	D	I	Q	T	R	L	G	L	H	S	E	W	R	T
Query Conservation
Alig confidence																																		.					.	.	.	.	.	.	.												.
Template Conservation																																		.					.	.	.	.	.	.	.												.
Template Sequence		N	G	L	E	F	T	S	S	G	S	A	N	T	E	T	T	K	V	T	G	S	L	E	T	K	Y	R	W	T	E	Y	G	.	L	T	F	T	.	.	.	.	.	.	.	E	K	W	N	T	D	N	T	L	G	T	.	E	I	T	V	E	D	Q	L	A	R	G	L	K	L	T	F	D	S	S	F	S	P	N	T
Template Known Secondary structure		T	T											S	S	S															S	B		.					.	.	.	.	.	.	.					T	T	T					.								T	T													T	T	T
Template Predicted Secondary structure																																		.					.	.	.	.	.	.	.												.
Template SS confidence
		37	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.		.	70	.	.								.	.	.	.	.	.	.	80	.	.	.		.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.
		1172	.	.	.	.	.	.	.	1180	.	.	.	.	.	.	.	.	.	1190	.	.	.	.	.	.	.	.	.	1200	.	.	.	.	.	.	.	.	.	1210	.	.	.	.	.	.	.	.	.	1220	.	.	.	.	.	.	.	.	.	1230	.	.	.	.	.	.	.	.	.	1240	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	V	H	V	I	P	T	L	D	L	N	Y	Y	H	D	P	H	S	T	E	I	E	E	D	G	S	T	I	S	D	D	A	V	K	Q	R	G	E	I	K	V	G	V	T	G	N	I	S	Q	R	V	S	L	R	G	S	V	A	W	Q	K	G	S	D	D	F	A	Q	T	A	G	F	L	S	M	T	V	K
Query Conservation
Alig confidence					.																																				.	.	.	.	.	.	.	.																							.	.
Template Conservation					.																																				.	.	.	.	.	.	.	.																							.	.
Template Sequence		G	K	K	.	N	A	K	I	K	T	G	Y	K	R	E	H	I	N	L	G	C	D	M	D	F	D	I	A	G	P	S	I	R	G	A	L	V	L	G	.	.	.	.	.	.	.	.	Y	E	G	W	L	A	G	Y	Q	M	N	F	E	T	A	K	S	R	V	T	Q	S	.	.	N	F	A	V	G	Y	K
Template Known Secondary structure					.											S	S										S	S	S	S											.	.	.	.	.	.	.	.		T	T											T	T	T	T	S					.	.
Template Predicted Secondary structure					.																																				.	.	.	.	.	.	.	.																							.	.
Template SS confidence
		108	.	110		.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.									.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.			.	.	170	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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