Job Description P45508 Confidence 98.69% Date Thu Jan 5 12:02:51 GMT 2012 Rank 18 Aligned Residues 161 % Identity 12% Template c2f1tB_ PDB info PDB header:membrane protein Chain: B: PDB Molecule:outer membrane protein w; PDBTitle: outer membrane protein ompw Resolution 3.00 Å

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		1075	.	.	.	.	1080	.	.	.	.	.	.	.	.	.	1090	.	.	.	.	.	.	.	.	.	1100	.	.	.	.	.	.	.	.	.	1110	.	.	.	.	.	.	.	.	.	1120	.	.	.	.	.	.	.	.	.	1130	.	.	.	.	.	.	.	.	.	1140	.	.	.	.	.	.	.	.	.	1150	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Q	K	Q	G	A	W	L	D	S	W	L	Q	Y	A	W	F	S	N	D	V	S	E	Q	E	D	G	T	D	H	Y	H	S	S	G	I	I	A	S	L	E	A	G	Y	Q	W	L	P	G	R	G	V	V	I	E	P	Q	A	Q	V	I	Y	Q	G	V	Q	Q	D	D	F	T	A	A	N	R	A	R	V	S	Q	S
Query Conservation
Alig confidence															.	.	.	.	.	.													.															.	.							.	.	.	.																	.	.
Template Conservation															.	.	.	.	.	.													.															.	.							.	.	.	.																	.	.
Template Sequence		E	A	G	E	F	F	M	R	A	G	S	A	T	.	.	.	.	.	.	V	R	P	T	E	G	G	G	F	S	V	T	.	N	N	T	Q	L	G	L	T	F	T	Y	M	A	T	.	.	D	N	I	G	V	E	.	.	.	.	L	L	A	A	T	P	F	R	H	K	I	G	T	R	A	T	.	.	G	D	I	A
Template Known Secondary structure			T	T											.	.	.	.	.	.													.															.	.	T	T					.	.	.	.					S									T	T	T	.	.
Template Predicted Secondary structure															.	.	.	.	.	.													.															.	.							.	.	.	.																	.	.
Template SS confidence
		2	.	.	.	.	.	.	.	10	.	.	.	.							.	.	.	.	.	20	.	.	.	.	.	.		.	.	.	30	.	.	.	.	.	.	.	.	.	40			.	.	.	.	.	.					.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.			.	.	.	.
		1155	.	.	.	.	1160	.	.	.	.	.	.	.	.	.		1170	.	.	.	.	.	.	.	.	.	1180	.	.	.	.	.	.	.	.	.	1190	.	.	.	.						.	.	.	.	.	1200	.	.	.	.	.	.	.	.	.	1210	.	.	.	.	.	.	.	.	.	1220	.	.	.	.	.	.	.	.
Predicted Secondary structure																	.																										.	.	.	.	.
Query SS confidence																	.																										.	.	.	.	.
Query Sequence		Q	G	D	D	I	Q	T	R	L	G	L	H	S	E	W	.	R	T	A	V	H	V	I	P	T	L	D	L	N	Y	Y	H	D	P	H	S	T	E	I	E	E	.	.	.	.	.	D	G	S	T	I	S	D	D	A	V	K	Q	R	G	E	I	K	V	G	V	T	G	N	I	S	Q	R	V	S	L	R	G	S	V
Query Conservation																	.																										.	.	.	.	.
Alig confidence																	.																										.	.	.	.	.
Template Conservation
Template Sequence		T	V	H	H	L	P	P	T	L	M	A	Q	W	Y	F	G	D	A	S	S	K	F	R	P	Y	V	G	A	G	I	N	Y	T	T	F	F	D	N	G	F	N	D	H	G	K	E	A	G	L	S	D	L	S	L	K	D	S	W	G	A	A	G	Q	V	G	V	D	Y	L	I	N	R	D	W	L	V	N	M	S	V
Template Known Secondary structure																	S		T	T		S																										T	T																							S	S	S
Template Predicted Secondary structure
Template SS confidence
		75	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.
		1229	1230	.	.																.	.	.	.	.	.	.	1240	.	.	.	.	.	.	.	.	.	1250
Predicted Secondary structure						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		A	W	Q	K	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	G	S	D	D	F	A	Q	T	A	G	F	L	S	M	T	V	K	W
Query Conservation						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		W	Y	M	D	I	D	T	T	A	N	Y	K	L	G	G	A	Q	Q	H	D	S	V	R	L	D	P	W	V	F	M	F	S	A	G	Y	R	F
Template Known Secondary structure															S	S
Template Predicted Secondary structure
Template SS confidence
		155	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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