Job Description P45508 Confidence 5.56% Date Thu Jan 5 12:02:51 GMT 2012 Rank 63 Aligned Residues 255 % Identity 8% Template c1xkhC_ PDB info PDB header:membrane protein Chain: C: PDB Molecule:ferripyoverdine receptor; PDBTitle: pyoverdine outer membrane receptor fpva from pseudomonas aeruginosa2 pao1 bound to pyoverdine Resolution 3.60 Å

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		988	.	990	.	.	.	.	.	.	.	.	.	1000	.	.	.	.	.	.	.	.	.	1010	.	.	.	.	.	.	.	.	.	1020	.	.	.	.	.	.	.	.	.	1030	.	.	.	.	.	.	.	.	.	1040	.	.	.	.	.	.	.	.	.	1050	.	.	.	.	.	.	.	.	.	1060	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		N	L	R	V	I	G	G	D	Y	H	Y	T	A	A	G	Q	L	A	Q	H	E	D	T	S	T	V	Q	L	S	G	D	L	F	S	G	R	W	G	T	D	G	E	W	M	L	G	I	V	G	G	Y	S	D	N	Q	G	D	S	R	S	N	M	T	G	T	R	A	D	N	Q	N	H	G	Y	A	V	G	L	T	S
Query Conservation
Alig confidence
Template Conservation
Template Sequence		L	N	L	F	L	G	G	R	V	V	D	Y	R	V	T	G	L	N	P	T	I	R	E	S	G	R	F	I	P	Y	V	G	A	V	Y	D	L	N	D	T	Y	S	V	Y	A	S	Y	T	D	I	F	X	P	Q	D	S	W	Y	R	D	S	S	N	K	L	L	E	P	D	E	G	Q	N	Y	E	I	G	I	K	G
Template Known Secondary structure																	S	S	S	S																			S	S	S																T	T				S	S	S
Template Predicted Secondary structure
Template SS confidence
		543	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.	600	.	.	.	.	.	.	.	.	.	610	.	.	.	.	.	.	.	.	.	620	.	.
		1068	.	1070	.	.	.	.	.	.	.	.	.	1080	.	.	.	.	.	.	.	.	.	1090	.	.	.	.	.	.	.	.	.	1100	.						.	.	.	.	.	.	.	.	1110	.	.	.	.	.	.	.	.	.	1120	.	.	.	.	.	.	.	.	.	1130	.	.	.	.	.	.	.	.	.	1140	.	.
Predicted Secondary structure																																				.	.	.	.	.
Query SS confidence																																				.	.	.	.	.
Query Sequence		S	W	F	Q	H	G	N	Q	K	Q	G	A	W	L	D	S	W	L	Q	Y	A	W	F	S	N	D	V	S	E	Q	E	D	G	T	.	.	.	.	.	D	H	Y	H	S	S	G	I	I	A	S	L	E	A	G	Y	Q	W	L	P	G	R	G	V	V	I	E	P	Q	A	Q	V	I	Y	Q	G	V	Q	Q	D	D
Query Conservation																																				.	.	.	.	.
Alig confidence																																				.	.	.	.	.
Template Conservation
Template Sequence		E	Y	L	D	G	R	L	N	T	S	L	A	Y	F	E	I	H	E	E	N	R	A	E	E	D	A	L	Y	N	S	K	P	T	N	P	A	I	T	Y	A	Y	K	G	I	K	A	K	T	K	G	Y	E	A	E	I	S	G	E	L	A	P	G	W	Q	V	Q	A	G	Y	T	H	K	I	I	R	D	D	S	G	K
Template Known Secondary structure				T	T	T	T																				S	S	T	T	S					T	T		S																					S	S	S	S															T	T
Template Predicted Secondary structure
Template SS confidence
		623	.	.	.	.	.	.	630	.	.	.	.	.	.	.	.	.	640	.	.	.	.	.	.	.	.	.	650	.	.	.	.	.	.	.	.	.	660	.	.	.	.	.	.	.	.	.	670	.	.	.	.	.	.	.	.	.	680	.	.	.	.	.	.	.	.	.	690	.	.	.	.	.	.	.	.	.	700	.	.
		1143	.	.	.	.	.	.	1150	.	.	.	.	.	.	.	.	.	1160	.	.	.	.	.	.	.	.	.	1170	.	.		.	.	.	.	.	.	.	1180	.	.	.	.	.	.	.	.	.	1190	.	.	.	.	.	.	.	.	.	1200	.	.	.	.	.	.	.	.	.	1210	.	.	.	.	.	.	.	.	.	1220	.
Predicted Secondary structure																																.
Query SS confidence																																.
Query Sequence		F	T	A	A	N	R	A	R	V	S	Q	S	Q	G	D	D	I	Q	T	R	L	G	L	H	S	E	W	R	T	A	.	V	H	V	I	P	T	L	D	L	N	Y	Y	H	D	P	H	S	T	E	I	E	E	D	G	S	T	I	S	D	D	A	V	K	Q	R	G	E	I	K	V	G	V	T	G	N	I	S	Q	R
Query Conservation																																.
Alig confidence									.	.	.	.	.	.	.	.																.
Template Conservation									.	.	.	.	.	.	.	.
Template Sequence		K	V	S	T	W	E	P	.	.	.	.	.	.	.	.	Q	D	Q	L	S	L	Y	T	S	Y	K	F	K	G	A	L	D	K	L	T	V	G	G	G	A	R	W	Q	G	K	S	W	Q	X	V	Y	N	N	P	R	S	R	W	E	K	F	S	Q	E	D	Y	W	L	V	D	L	X	A	R	Y	Q	I	T	D	K
Template Known Secondary structure		B			T	T	S		.	.	.	.	.	.	.	.	S													G	G	G	T	T																				G	G	G																							S	S	S
Template Predicted Secondary structure									.	.	.	.	.	.	.	.
Template SS confidence
		703	.	.	.	.	.	.									710	.	.	.	.	.	.	.	.	.	720	.	.	.	.	.	.	.	.	.	730	.	.	.	.	.	.	.	.	.	740	.	.	.	.	.	.	.	.	.	750	.	.	.	.	.	.	.	.	.	760	.	.	.	.	.	.	.	.	.	770	.	.	.	.
		1222	.	.	.	.	.	.							.	1230	.	.	.	.	.	.	.	.	.	1240							.	.	.	.	.	.	.	.	.	1250
Predicted Secondary structure									.	.	.	.	.	.													.	.	.	.	.	.
Query SS confidence									.	.	.	.	.	.													.	.	.	.	.	.
Query Sequence		V	S	L	R	G	S	V	.	.	.	.	.	.	A	W	Q	K	G	S	D	D	F	A	Q	T	.	.	.	.	.	.	A	G	F	L	S	M	T	V	K	W
Query Conservation									.	.	.	.	.	.													.	.	.	.	.	.
Alig confidence									.	.	.	.	.	.													.	.	.	.	.	.
Template Conservation
Template Sequence		L	S	A	S	V	N	V	N	N	V	F	D	K	T	Y	Y	T	N	I	G	F	Y	T	S	A	S	Y	G	D	P	R	N	L	X	F	S	T	R	W	D	F
Template Known Secondary structure									T	T	T	T								S		S	S	S								S								S
Template Predicted Secondary structure
Template SS confidence
		775	.	.	.	.	780	.	.	.	.	.	.	.	.	.	790	.	.	.	.	.	.	.	.	.	800	.	.	.	.	.	.	.	.	.	810	.	.	.	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions