Return to main results Retrieve Phyre Job Id

Job DescriptionP45508
Confidence3.11%DateThu Jan 5 12:02:51 GMT 2012
Rank95Aligned Residues140
% Identity13%Templatec1ogoX_
PDB info PDB header:hydrolaseChain: X: PDB Molecule:dextranase; PDBTitle: dex49a from penicillium minioluteum complex with isomaltose
Resolution1.65 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   1084.....1090.........1100.........1110.........1120 .........1130.........1140........
Predicted Secondary structure 










...............









Query SS confidence 




































. . . . . . . . . . . . . . .



























Query Sequence  WLQYAWFSNDVSEQEDGTDHYHSSGIIASLEAGYQWL. . . . . . . . . . . . . . . PGRGVVIEPQAQVIYQGVQQDDFTAANR
Query Conservation                              
 
 
    ...............      






 
     
       
Alig confidence 

















.

















...............


























.
Template Conservation 

 
  
 
 
  
    .    
    
                         
                
 
  

 .
Template Sequence  VRQSHKYSVQVSLAGTNN. FHDSFVYESIPRNGNGRIYAPTDPPNSNTLDSSVDDGISIEPSIGLNMAWSQFEYSHDVD.
Template Known Secondary structure  B
SSTTS

.



GGGGT
S
SSTTS
TT


S
TT


S
SST
SS
.
Template Predicted Secondary structure 







.



































.
Template SS confidence 















































































   34.....40.........50. ........60.........70.........80.........90.........100.........110.
 
   11491150.........1160. ........1170.........1180.........1190...... ...1200.........1210.......
Predicted Secondary structure 




.........












..





Query SS confidence 












. . . . . . . . .


































. .




















Query Sequence  ARVSQSQGDDIQT. . . . . . . . . RLGLHSEWRTAVHVIPTLDLNYYHDPHSTEIEEDG. . STISDDAVKQRGEIKVGVTGN
Query Conservation    
          .........
 
 
          
                   ..                
    
Alig confidence 












.........












..



















..




















Template Conservation 
 
             
 


             
..
   

    
   



  
  
           
       
Template Sequence  VKILATDGSSLGSPSDVVIRPVSISYAISQSDDGG. . IVIRVPADANGRKFSVEFKTDLYTFLSDGNEYVTSGGSVVGVE
Template Known Secondary structure  TTS




GGGSTTS


TTS
..


TT
GGG
SSSSSSS
Template Predicted Secondary structure 














..























Template SS confidence 















































































   112.......120.........130.........140...... ...150.........160.........170.........180.........
 
   1218.1220.......
Predicted Secondary structure 


Query SS confidence 









Query Sequence  ISQRVSLRGS
Query Conservation        
   
Alig confidence 









Template Conservation 
  

 


 
Template Sequence  PTNALVIFAS
Template Known Secondary structure  S
Template Predicted Secondary structure 



Template SS confidence 









   190.........
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions