Job Description P0ABD8 Confidence 96.51% Date Thu Jan 5 11:15:15 GMT 2012 Rank 44 Aligned Residues 52 % Identity 21% Template c2aujD_ PDB info PDB header:transferase Chain: D: PDB Molecule:dna-directed rna polymerase beta' chain; PDBTitle: structure of thermus aquaticus rna polymerase beta'-subunit2 insert Resolution 2.70 Å

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		102	.	.	.	.	.	.	.	110	.	.	.	.	.	.									.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.										.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.
Predicted Secondary structure																	.	.	.	.	.	.	.	.																					.	.	.	.	.	.	.	.	.
Query SS confidence																	.	.	.	.	.	.	.	.																					.	.	.	.	.	.	.	.	.
Query Sequence		F	I	E	V	G	Q	K	V	N	V	G	D	T	L	C	.	.	.	.	.	.	.	.	I	V	E	A	M	K	M	M	N	Q	I	E	A	D	K	S	G	T	V	K	.	.	.	.	.	.	.	.	.	A	I	L	V	E	S	G	Q	P	V	E	F	D	E	P	L	V
Query Conservation																	.	.	.	.	.	.	.	.																					.	.	.	.	.	.	.	.	.
Alig confidence																	.	.	.	.	.	.	.	.																					.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		I	V	P	E	G	A	K	V	Q	A	G	E	K	I	V	A	A	I	D	P	E	E	E	V	I	A	E	A	E	G	V	V	H	L	H	E	P	A	S	I	L	V	V	K	A	R	V	Y	P	F	E	D	D	V	E	V	T	T	G	D	R	V	A	P	G	D	V	L	A
Template Known Secondary structure			S		T	T					T	T							S	S	G	G	G					S	S	S															S							S	S		B	S			T	T			B		T	T
Template Predicted Secondary structure
Template SS confidence
		354	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions