Job Description P0ABD8 Confidence 59.44% Date Thu Jan 5 11:15:15 GMT 2012 Rank 77 Aligned Residues 85 % Identity 8% Template c1q90A_ PDB info PDB header:photosynthesis Chain: A: PDB Molecule:apocytochrome f; PDBTitle: structure of the cytochrome b6f (plastohydroquinone : plastocyanin2 oxidoreductase) from chlamydomonas reinhardtii Resolution 3.10 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		26	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	E	E	S	V	R	I	S	R	A	A	P	A	A	S	F	P	V	M	Q	Q	A	Y	A	A	P	M	M	Q	Q	P	A	Q	S	N	A	A	A	P	A	T	V	P	S	M	E	A	P	A	A	A	E	I	S	G	H	I	V	R	S	P	M	V	G	T	F	Y	R	T	P	S	P	D	A	K	A	F	I	E	V
Query Conservation
Alig confidence																																													.	.	.	.	.
Template Conservation																																													.	.	.	.	.
Template Sequence		L	K	Y	P	I	Y	F	G	G	N	R	G	R	G	Q	V	Y	P	D	G	K	K	S	N	N	T	I	Y	N	A	S	A	A	G	K	I	V	A	I	T	A	L	S	.	.	.	.	.	E	K	K	G	G	F	E	V	S	I	E	K	A	N	G	E	V	V	V	D	K	I	P	A	G	P	D	L	I	V	K	E
Template Known Secondary structure													S			S			T	T	S				T	T	S			B		S	S	S											.	.	.	.	.	T	T	T										S	S	S									S	S	S		B				T
Template Predicted Secondary structure																																													.	.	.	.	.
Template SS confidence
		144	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.						.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.
		106	.	.	.	110	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	Q	K	V	N	V	G	D	T	L
Query Conservation
Alig confidence
Template Conservation
Template Sequence		G	Q	T	V	Q	A	D	Q	P	L
Template Known Secondary structure		T					T	T		B	S
Template Predicted Secondary structure
Template SS confidence
		219	220	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions