Job Description P46923 Confidence 100.00% Date Thu Jan 5 12:04:40 GMT 2012 Rank 21 Aligned Residues 570 % Identity 19% Template d2jioa2 SCOP info Formate dehydrogenase/DMSO reductase, domains 1-3 Formate dehydrogenase/DMSO reductase, domains 1-3 Formate dehydrogenase/DMSO reductase, domains 1-3 Resolution 2.2

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		30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.				.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.
Predicted Secondary structure																																							.	.	.
Query SS confidence																																							.	.	.
Query Sequence		W	A	E	E	K	G	G	K	I	L	T	A	G	R	W	G	A	M	N	V	E	V	K	D	G	K	I	V	S	S	T	G	A	L	A	K	T	.	.	.	I	P	N	S	L	Q	S	T	A	A	D	Q	V	H	T	T	A	R	I	Q	H	P	M	V	R	K	S	Y	L	D	N	P	L	Q	P	A	K	G	R	G
Query Conservation																																							.	.	.
Alig confidence																																							.	.	.																												.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																																																					.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		P	E	K	W	V	K	G	V	C	R	Y	C	G	T	G	C	G	V	L	V	G	V	K	D	G	K	A	V	A	I	Q	G	D	P	N	N	H	N	A	G	L	L	C	L	K	G	S	L	L	I	P	V	L	N	S	K	E	R	V	T	Q	P	L	V	R	R	H	.	.	.	.	.	.	.	.	.	.	.	.	K
Template Known Secondary structure			S								S	S		T	T										T	T									T	T	S	T	T	T	T								T								S		S			S					S	S	.	.	.	.	.	.	.	.	.	.	.	.	T
Template Predicted Secondary structure																																																																					.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		5	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.													.
		107	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.		.	.	.	.	.	.	.		170	.	.	.	.	.	.	.	.	.	180	.	.	.	.
Predicted Secondary structure																																																										.								.
Query SS confidence																																																										.								.
Query Sequence		E	D	T	Y	V	Q	V	S	W	E	Q	A	L	K	L	I	H	E	Q	H	D	R	I	R	K	A	N	G	P	S	A	I	F	A	G	S	Y	G	W	R	S	S	G	V	L	H	K	A	Q	T	L	L	Q	R	Y	M	.	N	L	A	G	G	Y	S	.	G	H	S	G	D	Y	S	T	G	A	A	Q	V	I	M
Query Conservation																																																										.								.
Alig confidence																																											.	.	.	.												.								.
Template Conservation																																											.	.	.	.
Template Sequence		G	G	K	L	E	P	V	S	W	D	E	A	L	D	L	M	A	S	R	F	R	S	S	I	D	M	Y	G	P	N	S	V	A	W	Y	G	S	G	Q	C	L	.	.	.	.	T	E	E	S	Y	V	A	N	K	I	F	K	G	G	F	G	T	N	N	V	D	G	N	P	R	L	C	M	A	S	A	V	G	G	Y
Template Known Secondary structure		T																												G	G	G							T	T	S		.	.	.	.														T	T								G	G	G	G	T	T
Template Predicted Secondary structure																																											.	.	.	.
Template SS confidence
		73	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.					.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.
		185	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		P	H	V	V	G	S	V	E	V	Y	E	Q	Q	T	S	W	P	L	I	L	E	N	S	Q	V	V	V	L	W	G	M	N	P	L	N	T	L	K	I	A	W	S	S	T	D	E	Q	G	L	E	Y	F	H	Q	L	K	K	S	G	K	P	V	I	A	I	D	P	I	R	S	E	T	I	E	F	F	D	D	N	A
Query Conservation
Alig confidence							.	.	.	.																																			.	.	.	.	.	.																													.	.	.
Template Conservation							.	.	.	.																																			.	.	.	.	.	.																													.	.	.
Template Sequence		V	T	S	F	G	.	.	.	.	K	D	E	P	M	G	T	Y	A	D	I	D	Q	A	T	C	F	F	I	I	G	S	N	T	S	E	A	H	P	V	L	F	R	R	.	.	.	.	.	.	I	A	R	R	K	Q	V	E	P	G	V	K	I	I	V	A	D	P	R	R	T	N	T	S	R	I	A	D	.	.	.
Template Known Secondary structure						S	.	.	.	.	S		S		S	S		G	G	G	G	G	T		S						S							S							.	.	.	.	.	.									T	T								S	S			G	G	G	G	G		S	.	.	.
Template Predicted Secondary structure							.	.	.	.																																			.	.	.	.	.	.																													.	.	.
Template SS confidence
		149	150	.	.	.					.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.							.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.
		265	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300										.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.
Predicted Secondary structure																																						.	.	.	.	.	.	.	.	.
Query SS confidence																																						.	.	.	.	.	.	.	.	.
Query Sequence		T	W	I	A	P	N	M	G	T	D	V	A	L	M	L	G	I	A	H	T	L	M	T	Q	G	K	H	D	K	V	F	L	E	K	Y	T	.	.	.	.	.	.	.	.	.	T	G	Y	P	Q	F	E	E	Y	L	T	G	K	S	D	N	T	P	K	S	A	V	W	A	A	E	I	T	G	V	P	E	A	Q	I
Query Conservation																																						.	.	.	.	.	.	.	.	.
Alig confidence																																						.	.	.	.	.	.	.	.	.											.	.	.	.	.	.
Template Conservation																																																									.	.	.	.	.	.
Template Sequence		M	H	V	A	F	R	P	G	T	D	L	A	F	M	H	S	M	A	W	V	I	I	N	E	E	L	D	N	P	R	F	W	Q	R	Y	V	N	F	M	D	A	E	G	K	P	S	D	F	E	G	Y	K	A	F	L	.	.	.	.	.	.	E	N	Y	R	P	E	K	V	A	E	I	C	R	V	P	V	E	Q	I
Template Known Secondary structure								T	T																T	T		S														T	T	S													.	.	.	.	.	.	G	G	G										T	S
Template Predicted Secondary structure																																																									.	.	.	.	.	.
Template SS confidence
		216	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270							.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.
		336	.	.	.	340	.	.	.		.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.
Predicted Secondary structure										.
Query SS confidence										.
Query Sequence		V	K	L	A	E	L	M	A	.	A	N	R	T	M	L	M	A	G	W	G	I	Q	R	Q	Q	Y	G	E	Q	K	H	W	M	L	V	T	L	A	A	M	L	G	Q	I	G	T	P	G	G	G	F	G	F	S	Y	H	Y	S	N	G	G	N	P	T	R	V	G	G	V	L	P	E	M	S	A	A	I	A	G	H
Query Conservation										.
Alig confidence										.
Template Conservation
Template Sequence		Y	G	A	A	R	A	F	A	E	S	A	A	T	M	S	L	W	C	M	G	I	N	Q	R	V	Q	G	V	F	A	N	N	L	I	H	N	L	H	L	I	T	G	Q	I	C	R	P	G	A	T	S	F	S	L	T	G	Q	P	N	A	C	G	G	V	R	D	G	G	A	L	S	H	L	L	P	A	G	R	A	I
Template Known Secondary structure											S	S	S											S	S	T	T																T			S	B	T	T	B								S	S	S					T	T	T	T	T		S	T	T			T	T	T			T
Template Predicted Secondary structure
Template SS confidence
		290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.
		415	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.		.	.	.	.	.	.	490	.	.	.
Predicted Secondary structure																																																																							.
Query SS confidence																																																																							.
Query Sequence		A	S	E	A	A	D	D	G	G	M	T	A	I	P	V	A	R	I	V	D	A	L	E	N	P	G	G	K	Y	Q	H	N	G	K	E	Q	T	Y	P	N	I	K	M	I	W	W	A	G	G	G	N	F	T	H	H	Q	D	T	N	R	L	I	K	A	W	Q	K	P	E	.	M	I	V	V	S	E	C	Y	W	T
Query Conservation																																																																							.
Alig confidence															.																																																								.
Template Conservation															.
Template Sequence		P	N	A	K	H	R	A	E	M	E	K	L	W	.	G	L	P	E	G	R	I	A	P	E	P	G	Y	H	T	V	A	L	F	E	A	L	G	R	G	D	V	K	C	M	I	I	C	E	T	N	P	A	H	T	L	P	N	L	N	K	V	H	K	A	M	S	H	P	E	S	F	I	V	C	I	E	A	F	P	D
Template Known Secondary structure		T													.	T			T	T		S		S	S															T	S	S							S							S	S	S								T	T		T	T								S		T	T
Template Predicted Secondary structure															.
Template SS confidence
		370	.	.	.	.	.	.	.	.	.	380	.	.		.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.
			494	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560	.	.	.	.	.	.	.	.	.	570	.	.
Predicted Secondary structure		.
Query SS confidence		.
Query Sequence		.	A	A	A	K	H	A	D	I	V	L	P	I	T	T	S	F	E	R	N	D	L	T	M	T	G	D	Y	S	N	Q	H	I	V	P	M	K	Q	A	V	A	P	Q	F	E	A	R	N	D	F	D	V	F	A	D	L	A	E	L	L	K	P	G	G	K	E	I	Y	T	E	G	K	D	E	M	A	W	L	K	F
Query Conservation		.
Alig confidence		.																													.	.	.																																.	.
Template Conservation																															.	.	.																																.	.
Template Sequence		A	V	T	L	E	Y	A	D	L	V	L	P	P	A	F	W	C	E	R	D	G	V	Y	G	C	G	E	R	R	.	.	.	Y	S	L	T	E	K	A	V	D	P	P	G	Q	C	R	P	T	V	N	T	L	V	E	F	A	R	R	A	G	V	D	.	.	P	Q	L	V	N	F	R	N	A	E	D	V	W	N	E
Template Known Secondary structure			G	G	G	G	T		S					B			G	G	G	S							T	T	S		.	.	.								S				T	T		B													T	T			.	.	G	G	G	G			S	S
Template Predicted Secondary structure																															.	.	.																																.	.
Template SS confidence
		449	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.				.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.			.	510	.	.	.	.	.	.	.	.	.	520	.	.	.
		573	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.	600	.	.	.	.	.	.	.	.	.	610									.	.	.	.	.	.	.	.	.	620	.	.	.	.	.	.	.	.	.	630	.	.	.	.	.	.	.	.	.	640	.	.
Predicted Secondary structure																																								.	.	.	.	.	.	.	.
Query SS confidence																																								.	.	.	.	.	.	.	.
Query Sequence		F	Y	D	A	A	Q	K	G	A	R	A	Q	R	V	T	M	P	M	F	N	A	F	W	Q	Q	N	K	L	I	E	M	R	H	S	E	K	N	E	.	.	.	.	.	.	.	.	Q	Y	V	R	Y	G	D	F	R	A	D	P	V	K	N	A	L	G	T	P	S	G	K	I	E	I	Y	S	K	T	L	E
Query Conservation																																								.	.	.	.	.	.	.	.
Alig confidence												.	.																											.	.	.	.	.	.	.	.
Template Conservation												.	.
Template Sequence		W	R	M	V	S	K	G	T	T	Y	.	.	D	F	W	G	M	T	R	E	R	L	R	K	E	S	G	L	I	W	P	C	P	S	E	D	H	P	G	T	S	L	R	Y	V	R	G	Q	D	P	C	V	P	A	D	H	P	D	R	F	F	F	Y	G	K	P	D	G	R	A	V	I	W	M	R	P	A	K
Template Known Secondary structure							T	T	S	T	T	.	.			T	T									S	S				S				S	T	T					S	S	T	T	B	T	T	T		T	T	S		T	T		S	S	S	B			T	T	S	T	T	S
Template Predicted Secondary structure												.	.
Template SS confidence
		524	.	.	.	.	.	530	.	.	.			.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.