 |
Job Description | P46923 | Confidence | 57.59% | Date | Thu Jan 5 12:04:40 GMT 2012 |
Rank | 126 | Aligned Residues | 106 |
% Identity | 19% | Template | c3tbfA_ |
PDB info |
PDB header:transferase | Chain: A: PDB Molecule:glucosamine--fructose-6-phosphate aminotransferase |
PDBTitle: c-terminal domain of glucosamine-fructose-6-phosphate aminotransferase2 from francisella tularensis.
|
Resolution | 2.28 Å |
|
 |
  |   |
233 | . | . | . | . | . | . | 240 | . | . | . | |
. | . | . | . | . | . | 250 | |
. | . | . | . | . | . | . | . | . | 260 | . | . | . | . | . | . | . | . | . | 270 | . | . | . | . | |
|
|
|
|
|
|
|
|
|
|
|
|
. | . | . | . | . | 280 | . | . | . | . | . | . | . | . | . | 290 | . | . | . | . | . | . | . |
Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |
|
| . |
|  |  |  |  |  |  | . |
|
|
|
|  |  |  |  |  |
|
|
|
|
|  |  |  |
|
|
|
|
|
|  | . | . | . | . | . | . | . | . | . | . | . | . | . |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
L | E | Y | F | H | Q | L | K | K | S | G | . |
K | P | V | I | A | I | D | . |
P | I | R | S | E | T | I | E | F | F | D | D | N | A | T | W | I | A | P | N | M | G | T | D | . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
V | A | L | M | L | G | I | A | H | T | L | M | T | Q | G | K | H | D | K | V | F | L | E |
Query Conservation |   |
  |   |   |   |   |   |
|   |   |   |
| . |   |
|
|
|
|
|
| . |
|
|   |
|   |
|
|   |   |
|
|   |   |   |   |   |
|   |
|   |
|
|
|
| . | . | . | . | . | . | . | . | . | . | . | . | . |   |
|
|   |
|
|   |   |   |   |
|
|   |   |   |   |   |
|   |   |
|
|   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
| . | . | . |
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |   |
|   |   |   |
|   |   |   |
|   |   |   |
|
|   |
|
|   |   |   |   |
|   |
|
|   |   |
|
| . | . | . |   |   |
|   |   |   |   |
|   |
|   |   |   |   |   |
|   |
|   |   |   |   |   |   |   |
|   |
|
|
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
Template Sequence |   |
L | E | S | L | R | K | S | K | K | Q | N | Y | V | G | S | X | C | I | C | N | V | P | N | S | S | L | V | R | E | S | D | . |
. |
. |
I | A | F | X | T | K | A | G | V | E | I | G | V | A | S | T | K | A | F | T | T | Q | L | V | A | L | A | I | F | T | L | V | I | A | K | L | K | N | S | L | T | D | Q | Q | I | A |
Template Known Secondary structure |   |
 |  |  |  |  |  |  | T | T | T | T |  |  |  |  |  |  |  |  | S | S | S | S | S |  |  |  |  |  | S | S | . | . | . |  |  |  |  |
|
|
|
|
|
|
| B | S | S |
| S |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | T | T |
| S |
|  |  |  |  |  |
Template Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |
|
| . | . | . |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
358 | . | 360 | . | . | . | . | . | . | . | . | . | 370 | . | . | . | . | . | . | . | . | . | 380 | . | . | . | . | . | . | . | . | |
|
|
. | 390 | . | . | . | . | . | . | . | . | . | 400 | . | . | . | . | . | . | . | . | . | 410 | . | . | . | . | . | . | . | . | . | 420 | . | . | . | . | . | . | . | . | . | 430 | . | . | . | . |
  |
  |   |
298 | . | 300 | . | . | . | . | . | . | . | . | . | 310 | . | . | . | . | . | . | . | . | . | 320 | . | . | . | . | . | . | . | . | . | 330 | . | . | . | . | . | . | . | . | . | 340 | . | . | . | . | . | . | . | . | . | 350 | . | . | . | . | . | . |
Predicted Secondary structure |   |
 |  |
|
|
|  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |
|
|  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
K | Y | T | T | G | Y | P | Q | F | E | E | Y | L | T | G | K | S | D | N | T | P | K | S | A | V | W | A | A | E | I | T | G | V | P | E | A | Q | I | V | K | L | A | E | L | M | A | A | N | R | T | M | L | M | A | G | W | G | I | Q |
Query Conservation |   |
  |   |
|   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|
|
|   |
|
|   |
|
|
|
|   |   |   |   |
|   |   |
|
|   |   |   |
|   |   |   |   |   |
|   |   |
|   |
|   |   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . | . | . | . | . | . | . | . |
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |   |   |   |   |
|   |   |   |   |   |   |   | . | . | . | . | . | . | . | . | . | . | . | . | . | . |   |   |   |   |   |   | . |   |   |   |   |   |   |   |
|   |   |   |   |   |   |   |   |   |   |   |
|
|   |
|   |   |
Template Sequence |   |
K | Y | T | E | E | L | K | N | I | R | A | L | V | . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
X | G | A | L | K | L | . |
D | T | E | I | D | Q | I | S | E | Y | F | S | D | K | E | H | T | I | F | L | G | R | G | L | Y |
Template Known Secondary structure |   |
 |  |  |  |  |  |  | T |  |  |  |  |  | . | . | . | . | . | . | . | . | . | . | . | . | . | . |  |  |  |  | T | T | . |  |  |  |  |  |  |  |  | G | G | G | T | T |
|
|  |  |  |  |  |  |
| T | T |  |
Template Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  |  |  | . | . | . | . | . | . | . | . | . | . | . | . | . | . |  |  |  |  |
|
| . |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |
|
|
|
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
435 | . | . | . | . | 440 | . | . | . | . | . | . | . | |
|
|
|
|
|
|
|
|
|
|
|
|
|
. | . | 450 | . | . | . | |
. | . | . | . | . | . | 460 | . | . | . | . | . | . | . | . | . | 470 | . | . | . | . | . | . | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|