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Job DescriptionP46923
Confidence81.38%DateThu Jan 5 12:04:40 GMT 2012
Rank95Aligned Residues111
% Identity14%Templatec3shoA_
PDB info PDB header:transcription regulatorChain: A: PDB Molecule:transcriptional regulator, rpir family; PDBTitle: crystal structure of rpir transcription factor from sphaerobacter2 thermophilus (sugar isomerase domain)
Resolution1.80 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   124.....130.........140.........150.........160.........170.........180.........190.........200...
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Query Sequence  EQHDRIRKANGPSAIFAGSYGWRSSGVLHKAQTLLQRYMNLAGGYSGHSGDYSTGAAQVIMPHVVGSVEVYEQQTSWPLI
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Template Sequence  EAIEAAVEAIRADHVIVVG. . . . . XGFSAAVAVFLGHGLNSLGIRTTVLTEGGSTLTITLA. . . . . . . . . . . . . . . . . . N
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   122.......130.........140 .........150.........160.........170....... .
 
   204.....210.........220.........230.........240......... 250.........260.........270
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Query Sequence  LENSQVVVLWGMNPLNTLKIAWSSTDEQGLEYFHQLKKSGKPVIAI. DPIRSETIEFFDDNATWIAPN
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Template Sequence  LRPTDLXIGVS. . . . . . . . . . VWRYLRDTVAALAGAAERGVPTXALTDSSVSPPARIAD. . . HVLVAA
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   180.........190 .........200.........210.........220........ .230....
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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