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Job DescriptionP46923
Confidence87.22%DateThu Jan 5 12:04:40 GMT 2012
Rank84Aligned Residues190
% Identity12%Templatec3g68A_
PDB info PDB header:isomeraseChain: A: PDB Molecule:putative phosphosugar isomerase; PDBTitle: crystal structure of a putative phosphosugar isomerase (cd3275) from2 clostridium difficile 630 at 1.80 a resolution
Resolution1.80 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   117..120......... 130.........140.........150.........160.........170.........180.........190...
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Query Sequence  QALKLIHEQHDRI. . . RKANGPSAIFAGSYGWRSSGVLHKAQTLLQRYMNLAGGYSGHSGDYSTGAAQVIMPHVVGSVEV
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Template Sequence  VRXREIISNADSLFNEVKRTNLKKIIIT. . . . GSGTSYHSGVQVQPYLQNLLDIDVVKXYPFXITEDTF. . . . . . . . . . .
Template Known Secondary structure  TTTGGGS

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   12.......20.........30......... 40.........50.........60.........70......
 
   194.....200.........210.........220.........230.........240......... 250.........260.........270..
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Query Sequence  YEQQTSWPLILENSQVVVLWGMNPLNTLKIAWSSTDEQGLEYFHQLKKSGKPVIAI. DPIRSETIEFFDDNATWIAPNMG
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Template Sequence  . . . . . . . . . KFDNENTLVVGVSQGGSSYSTY. . . . . . . . . NAXKLAEDKGCKIASXAGCKNALIDEISD. . . YILTVNCG
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   77..80.........90........ .100.........110.........120....... ..130.....
 
   273. .....280.........290.........300.........310.........320.........330.........
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Query Sequence  TD. . . . . . . . . . . . . VALMLGIAHTLMTQGKHDKVFLEKYTTGYPQFEEYLTGKSDNTPKSAVWAAEITGVPEAQIVKLA
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Template Sequence  EEKSGAKTKGYYCTKLNLXLLGLQIAREKGIISSEKYNEEINKILDAINRF. . . . . . . . . . . . . . EAVYKLSKQWIERNK
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   136...140.........150.........160.........170.........180...... ...190.........200.
 
   340.........350......
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Query Sequence  ELMAANRTMLMAGWGIQ
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Template Sequence  EKLVNSKEIRIIGHSDI
Template Known Secondary structure  T


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   202.......210........
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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