Job Description P46923 Confidence 89.46% Date Thu Jan 5 12:04:40 GMT 2012 Rank 77 Aligned Residues 190 % Identity 17% Template c3fj1A_ PDB info PDB header:isomerase Chain: A: PDB Molecule:putative phosphosugar isomerase; PDBTitle: crystal structure of putative phosphosugar isomerase (yp_167080.1)2 from silicibacter pomeroyi dss-3 at 1.75 a resolution Resolution 1.75 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		111	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.				.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.
Predicted Secondary structure																							.	.	.
Query SS confidence																							.	.	.
Query Sequence		V	Q	V	S	W	E	Q	A	L	K	L	I	H	E	Q	H	D	R	I	R	K	.	.	.	A	N	G	P	S	A	I	F	A	G	S	Y	G	W	R	S	S	G	V	L	H	K	A	Q	T	L	L	Q	R	Y	M	N	L	A	G	G	Y	S	G	H	S	G	D	Y	S	T	G	A	A	Q	V	I	M	P	H	V
Query Conservation																							.	.	.
Alig confidence																							.	.	.												.	.	.	.	.																																		.	.	.	.	.	.	.
Template Conservation																																					.	.	.	.	.																																		.	.	.	.	.	.	.
Template Sequence		I	P	E	A	V	Q	R	L	L	D	H	G	A	Q	D	V	A	R	V	A	A	V	L	R	L	R	D	P	S	F	V	A	T	V	A	.	.	.	.	.	R	G	S	S	D	H	V	C	T	Y	L	S	Y	A	A	E	L	L	L	G	L	P	V	A	S	L	G	P	S	V	A	S	V	.	.	.	.	.	.	.
Template Known Secondary structure																														S							.	.	.	.	.		T																										T					T	.	.	.	.	.	.	.
Template Predicted Secondary structure																																					.	.	.	.	.																																		.	.	.	.	.	.	.
Template SS confidence
		15	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.						50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.
		188	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.		250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.
Predicted Secondary structure																																																																.
Query SS confidence																																																																.
Query Sequence		V	G	S	V	E	V	Y	E	Q	Q	T	S	W	P	L	I	L	E	N	S	Q	V	V	V	L	W	G	M	N	P	L	N	T	L	K	I	A	W	S	S	T	D	E	Q	G	L	E	Y	F	H	Q	L	K	K	S	G	K	P	V	I	A	I	.	D	P	I	R	S	E	T	I	E	F	F	D	D	N	A	T	W
Query Conservation																																																																.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.																	.	.	.	.	.	.	.	.	.	.																										.													.	.	.
Template Conservation		.	.	.	.	.	.	.	.	.	.	.																	.	.	.	.	.	.	.	.	.	.																																							.	.	.
Template Sequence		.	.	.	.	.	.	.	.	.	.	.	Y	D	A	R	L	R	L	D	R	A	L	C	L	A	V	S	.	.	.	.	.	.	.	.	.	.	Q	S	G	K	S	P	D	I	V	A	X	T	R	N	A	G	R	D	G	A	L	C	V	A	L	T	N	D	A	A	S	P	L	A	G	V	S	A	.	.	.	H	T
Template Known Secondary structure		.	.	.	.	.	.	.	.	.	.	.	T							T	T								.	.	.	.	.	.	.	.	.	.	S	S	S															T	T								S		T	T	S					T	S	S	.	.	.
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.																	.	.	.	.	.	.	.	.	.	.																																							.	.	.
Template SS confidence
													83	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.											.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.				.	.
		267	.	.	270	.	.								.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.
Predicted Secondary structure								.	.	.	.	.	.	.
Query SS confidence								.	.	.	.	.	.	.
Query Sequence		I	A	P	N	M	G	.	.	.	.	.	.	.	T	D	V	A	L	M	L	G	I	A	H	T	L	M	T	Q	G	K	H	D	K	V	F	L	E	K	Y	T	T	G	Y	P	Q	F	E	E	Y	L	T	G	K	S	D	N	T	P	K	S	A	V	W	A	A	E	I	T	G	V	P	E	A	Q	I	V	K	L	A
Query Conservation								.	.	.	.	.	.	.
Alig confidence								.	.	.	.	.	.	.																																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		I	D	I	H	A	G	P	E	L	S	V	A	A	T	K	T	F	V	T	S	A	V	A	G	L	X	L	L	A	D	W	A	E	D	D	G	L	R	A	A	L	G	N	L	P	E	T	L	A	A	A	S	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	R	I	D	W	P	E	X	R
Template Known Secondary structure											S	T	T																					T										T										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	T
Template Predicted Secondary structure																																																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		139	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190																					.	.	.	.	.	.	.	.
		340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		E	L	M	A	A	N	R	T	M	L	M	A	G	W	G	I	Q
Query Conservation
Alig confidence
Template Conservation
Template Sequence		V	A	I	G	A	R	P	S	L	F	T	L	G	R	G	T	S
Template Known Secondary structure							S									G	G	G
Template Predicted Secondary structure
Template SS confidence
		199	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions