Job Description P46923 Confidence 41.40% Date Thu Jan 5 12:04:40 GMT 2012 Rank 139 Aligned Residues 194 % Identity 18% Template c3eyaE_ PDB info PDB header:oxidoreductase Chain: E: PDB Molecule:pyruvate dehydrogenase [cytochrome]; PDBTitle: structural basis for membrane binding and catalytic2 activation of the peripheral membrane enzyme pyruvate3 oxidase from escherichia coli Resolution 2.50 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		116	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		E	Q	A	L	K	L	I	H	E	Q	H	D	R	I	R	K	A	N	G	P	S	A	I	F	A	G	S	Y	G	W	R	S	S	G	V	L	H	K	A	Q	T	L	L	Q	R	Y	M	N	L	A	G	G	Y	S	G	H	S	G	D	Y	S	T	G	A	A	Q	V	I	M	P	H	V	V	G	S	V	E	V	Y	E
Query Conservation
Alig confidence															.	.	.	.	.	.															.	.	.	.	.																					.																		.
Template Conservation															.	.	.	.	.	.															.	.	.	.	.																					.																		.
Template Sequence		E	E	E	L	R	K	L	A	Q	L	L	R	Y	.	.	.	.	.	.	S	S	N	I	A	L	M	C	G	S	G	C	A	G	.	.	.	.	.	A	H	K	E	L	V	E	F	A	G	K	I	K	A	P	I	V	H	A	L	.	R	G	K	E	H	V	E	Y	D	N	P	Y	D	V	G	M	T	.	G	L	I
Template Known Secondary structure														T	.	.	.	.	.	.			S							G	G	G	T	T	.	.	.	.	.													T							G	.	G	G					S	S	S		T	T	B					.	S	T	T
Template Predicted Secondary structure															.	.	.	.	.	.															.	.	.	.	.																					.																		.
Template SS confidence
		188	.	190	.	.	.	.	.	.	.	.	.	200							.	.	.	.	.	.	.	.	.	210	.	.	.	.						.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.		.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.		.	.	.
		196	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Q	Q	T	S	W	P	L	I	L	E	N	S	Q	V	V	V	L	W	G	M	N	P	L	N	T	L	K	I	A	W	S	S	T	D	E	Q	G	L	E	Y	F	H	Q	L	K	K	S	G	K	P	V	I	A	I	D	P	I	R	S	E	T	I	E	F	F	D	D	N	A	T	W	I	A	P	N	M	G	T	D	V
Query Conservation
Alig confidence																														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																						.	.	.							.	.
Template Conservation																														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																						.	.	.							.	.
Template Sequence		G	F	S	S	G	F	H	T	M	M	N	A	D	T	L	V	L	L	G	T	Q	F	P	Y	R	A	F	Y	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	P	T	D	A	K	I	I	Q	I	D	I	N	P	A	S	I	G	A	H	S	K	.	.	.	V	D	M	A	L	V	.	.	G	D	I
Template Known Secondary structure		S												S						S						G	G	G	S	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.		S	S	S							S		G	G	G	T	T	S	S	S		.	.	.		S					.	.
Template Predicted Secondary structure																														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																						.	.	.							.	.
Template SS confidence
		255	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.																		.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.				.	.	.	.	.	.			310	.	.
		276	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	L	M	L	G	I	A	H	T	L	M	T	Q	G	K	H	D	K	V	F	L	E	K	Y	T	T	G	Y	P	Q	F	E	E	Y	L	T	G	K	S	D	N	T	P	K	S	A	V	W	A	A	E	I	T	G	V	P	E	A	Q	I	V	K	L	A	E	L	M	A	A	N	R	T	M	L	M	A	G	W	G
Query Conservation
Alig confidence															.																						.	.	.	.	.	.	.	.	.
Template Conservation															.																						.	.	.	.	.	.	.	.	.
Template Sequence		K	S	T	L	R	A	L	L	P	L	V	E	E	.	K	A	D	R	K	F	L	D	K	A	L	E	D	Y	R	D	A	R	K	G	L	.	.	.	.	.	.	.	.	.	D	D	L	A	K	P	S	E	K	A	I	H	P	Q	Y	L	A	Q	Q	I	S	H	F	A	A	D	D	A	I	F	T	C	D	V	G
Template Known Secondary structure									G	G	G	S			.																						.	.	.	.	.	.	.	.	.				S				S	S		B													S		T	T							T	T
Template Predicted Secondary structure															.																						.	.	.	.	.	.	.	.	.
Template SS confidence
		313	.	.	.	.	.	.	320	.	.	.	.	.		.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.										.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions