Job Description P46923 Confidence 92.81% Date Thu Jan 5 12:04:40 GMT 2012 Rank 68 Aligned Residues 148 % Identity 16% Template c3etnD_ PDB info PDB header:isomerase Chain: D: PDB Molecule:putative phosphosugar isomerase involved in capsule PDBTitle: crystal structure of putative phosphosugar isomerase involved in2 capsule formation (yp_209877.1) from bacteroides fragilis nctc 93433 at 1.70 a resolution Resolution 1.70 Å

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		113	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	S	W	E	Q	A	L	K	L	I	H	E	Q	H	D	R	I	R	K	A	N	G	P	S	A	I	F	A	G	S	Y	G	W	R	S	S	G	V	L	H	K	A	Q	T	L	L	Q	R	Y	M	N	L	A	G	G	Y	S	G	H	S	G	D	Y	S	T	G	A	A	Q	V	I	M	P	H	V	V	G	S	V	E
Query Conservation
Alig confidence																		.	.	.	.	.										.	.	.	.	.																																						.	.	.	.	.	.	.	.
Template Conservation																		.	.	.	.	.										.	.	.	.	.																																						.	.	.	.	.	.	.	.
Template Sequence		D	A	Y	E	K	A	V	E	L	I	V	E	Q	I	H	R	.	.	.	.	.	K	K	G	K	L	V	T	S	G	.	.	.	.	.	X	G	K	A	G	Q	I	A	X	N	I	A	T	T	F	C	S	T	G	I	P	S	V	F	L	H	P	S	E	A	Q	H	G	D	L	G	I	.	.	.	.	.	.	.	.
Template Known Secondary structure		T													T	T	T	.	.	.	.	.	T									.	.	.	.	.	S																	T	T								T	T	G	G	G	G	T	G	G	G	G	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																		.	.	.	.	.										.	.	.	.	.																																						.	.	.	.	.	.	.	.
Template SS confidence
		23	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.						.	40	.	.	.	.	.	.	.						.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.
		193	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.			.	.	.	.	.	.	.	.		250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																																																			.	.									.
Query SS confidence																																																			.	.									.
Query Sequence		V	Y	E	Q	Q	T	S	W	P	L	I	L	E	N	S	Q	V	V	V	L	W	G	M	N	P	L	N	T	L	K	I	A	W	S	S	T	D	E	Q	G	L	E	Y	F	H	Q	L	K	K	.	.	S	G	K	P	V	I	A	I	.	D	P	I	R	S	E	T	I	E	F	F	D	D	N	A	T	W	I	A	P
Query Conservation																																																			.	.									.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.												.	.	.	.	.	.	.	.	.	.																		.	.									.													.	.	.
Template Conservation		.	.	.	.	.	.	.	.	.	.	.												.	.	.	.	.	.	.	.	.	.																																									.	.	.
Template Sequence		.	.	.	.	.	.	.	.	.	.	.	L	Q	E	N	D	L	L	L	L	I	S	.	.	.	.	.	.	.	.	.	.	N	S	G	K	T	R	E	I	V	E	L	T	Q	L	A	H	N	L	N	P	G	L	K	F	I	V	I	T	G	N	P	D	S	P	L	A	S	E	S	D	.	.	.	V	C	L	S	T
Template Known Secondary structure		.	.	.	.	.	.	.	.	.	.	.			T	T								.	.	.	.	.	.	.	.	.	.	S	S	S																	T	T								S		T	T	S						S	S	.	.	.
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.												.	.	.	.	.	.	.	.	.	.																																									.	.	.
Template SS confidence
													85	.	.	.	.	90	.	.	.	.	.											.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.				.	.	.	.	140
		270	.	.	.	.																.	.	.	.	.	280	.	.	.	.	.	.	.	.		.	290	.	.	.	.	.	.	.	.	.	300	.	.
Predicted Secondary structure							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.															.
Query SS confidence							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.															.
Query Sequence		N	M	G	T	D	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	V	A	L	M	L	G	I	A	H	T	L	M	T	Q	.	G	K	H	D	K	V	F	L	E	K	Y	T	T	G
Query Conservation							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.															.
Alig confidence							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.															.
Template Conservation
Template Sequence		G	H	P	A	E	V	C	T	L	G	X	T	P	T	T	S	T	T	V	X	T	V	I	G	D	I	L	V	V	Q	T	X	K	R	T	E	F	T	I	E	E	Y	S	K	R	H	H	G	G
Template Known Secondary structure								S	T	T	S		S	S	S																						T								T	T	S		G	G
Template Predicted Secondary structure
Template SS confidence
		141	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions