Job Description P46923 Confidence 89.44% Date Thu Jan 5 12:04:40 GMT 2012 Rank 78 Aligned Residues 153 % Identity 12% Template c2yvaB_ PDB info PDB header:dna binding protein Chain: B: PDB Molecule:dnaa initiator-associating protein diaa; PDBTitle: crystal structure of escherichia coli diaa Resolution 1.85 Å

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		116	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		E	Q	A	L	K	L	I	H	E	Q	H	D	R	I	R	K	A	N	G	P	S	A	I	F	A	G	S	Y	G	W	R	S	S	G	V	L	H	K	A	Q	T	L	L	Q	R	Y	M	N	L	A	G	G	Y	S	G	H	S	G	D	Y	S	T	G	A	A	Q	V	I	M	P	H	V	V	G	S	V	E	V	Y	E
Query Conservation
Alig confidence																			.	.								.	.	.	.
Template Conservation																			.	.								.	.	.	.
Template Sequence		P	D	A	I	S	R	A	A	M	T	L	V	Q	S	L	L	N	.	.	G	N	K	I	L	C	C	.	.	.	.	G	N	G	T	S	A	A	N	A	Q	H	F	A	A	S	M	I	N	R	F	E	T	E	R	P	S	L	P	A	I	A	L	N	T	D	N	V	V	L	T	A	I	A	N	D	R	L	H	D	E
Template Known Secondary structure																		T	.	.	T							.	.	.	.		S	T															T		S	S	S										S	S										T	T	S	T	T	G	G	G
Template Predicted Secondary structure																			.	.								.	.	.	.
Template SS confidence
		24	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40			.	.	.	.	.	.	.					.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.
		196	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.					260	.	.	.	.	.	.	.	.	.	270	.
Predicted Secondary structure																																																																		.	.	.	.
Query SS confidence																																																																		.	.	.	.
Query Sequence		Q	Q	T	S	W	P	L	I	L	E	N	S	Q	V	V	V	L	W	G	M	N	P	L	N	T	L	K	I	A	W	S	S	T	D	E	Q	G	L	E	Y	F	H	Q	L	K	K	S	G	K	P	V	I	A	I	D	P	I	R	S	E	T	I	E	F	.	.	.	.	F	D	D	N	A	T	W	I	A	P	N	M
Query Conservation																																																																		.	.	.	.
Alig confidence																															.	.	.	.	.	.	.	.	.																											.	.	.	.			.	.	.						.
Template Conservation																															.	.	.	.	.	.	.	.	.																																	.	.	.						.
Template Sequence		V	Y	A	K	Q	V	R	A	L	G	H	A	G	D	V	L	L	A	I	S	T	R	G	N	S	R	D	I	V	.	.	.	.	.	.	.	.	.	K	A	V	E	A	A	V	T	R	D	M	T	I	V	A	L	T	G	Y	D	G	G	E	L	A	G	L	L	G	P	Q	D	.	.	.	V	E	I	R	I	.	P
Template Known Secondary structure		T	T										T	T								S	S	S							.	.	.	.	.	.	.	.	.									T	T									T	T										T	T		.	.	.						.	S
Template Predicted Secondary structure																															.	.	.	.	.	.	.	.	.																																	.	.	.						.
Template SS confidence
		98	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.										.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.				.	160	.	.	.		.
		272	.	.	.	.					.	.	.	280	.	.	.	.	.	.	.
Predicted Secondary structure							.	.	.	.
Query SS confidence							.	.	.	.
Query Sequence		G	T	D	V	A	.	.	.	.	L	M	L	G	I	A	H	T	L	M	T
Query Conservation							.	.	.	.
Alig confidence							.	.	.	.
Template Conservation
Template Sequence		S	H	R	S	A	R	I	Q	E	M	H	M	L	T	V	N	C	L	C	D
Template Known Secondary structure			S
Template Predicted Secondary structure
Template SS confidence
		165	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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