Job Description P46923 Confidence 75.69% Date Thu Jan 5 12:04:40 GMT 2012 Rank 107 Aligned Residues 117 % Identity 12% Template c2vbgB_ PDB info PDB header:lyase Chain: B: PDB Molecule:branched-chain alpha-ketoacid decarboxylase; PDBTitle: the complex structure of the branched-chain keto acid2 decarboxylase (kdca) from lactococcus lactis with 2r-1-3 hydroxyethyl-deazathdp Resolution 1.80 Å

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		116	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		E	Q	A	L	K	L	I	H	E	Q	H	D	R	I	R	K	A	N	G	P	S	A	I	F	A	G	S	Y	G	W	R	S	S	G	V	L	H	K	A	Q	T	L	L	Q	R	Y	M	N	L	A	G	G	Y	S	G	H	S	G	D	Y	S	T	G	A	A	Q	V	I	M	P	H	V	V	G	S	V	E	V	Y	E
Query Conservation
Alig confidence															.	.	.	.	.	.															.	.	.																							.
Template Conservation															.	.	.	.	.	.															.	.	.																							.
Template Sequence		Q	V	I	L	S	K	I	E	E	S	L	K	N	.	.	.	.	.	.	A	Q	K	P	V	V	I	A	G	H	E	V	I	S	.	.	.	F	G	L	E	K	T	V	T	Q	F	V	S	E	T	K	L	P	I	T	T	L	N	.	F	G	K	S	A	V	D	E	S	L	P	S	F	L	G	I	Y	N	G	K	L
Template Known Secondary structure															.	.	.	.	.	.		S	S												.	.	.	T	T													T							S	.	T	T	T	T	S	S		T	T	S	T	T							G	G	G
Template Predicted Secondary structure															.	.	.	.	.	.															.	.	.																							.
Template SS confidence
		192	.	.	.	.	.	.	.	200	.	.	.	.							.	.	.	.	.	210	.	.	.	.	.	.	.	.				.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240		.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.
		196	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Q	Q	T	S	W	P	L	I	L	E	N	S	Q	V	V	V	L	W	G	M	N	P	L	N	T	L	K	I	A	W	S	S	T	D	E	Q	G	L	E	Y	F	H	Q	L	K	K	S	G	K	P	V	I	A	I	D	P	I	R	S
Query Conservation
Alig confidence																																			.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																			.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		S	E	I	S	L	K	N	F	V	E	S	A	D	F	I	L	M	L	G	V	K	L	T	D	S	S	T	G	A	F	T	H	H	.	.	.	.	.	.	.	.	.	.	.	.	L	D	E	N	K	M	I	S	L	N	I	D	E	G
Template Known Secondary structure		S												S						S					G	G	G	T	T	T	T				.	.	.	.	.	.	.	.	.	.	.	.			G	G	G						S	S
Template Predicted Secondary structure																																			.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		262	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.													.	.	.	.	.	300	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions