Return to main results Retrieve Phyre Job Id

Job DescriptionP46923
Confidence47.30%DateThu Jan 5 12:04:40 GMT 2012
Rank134Aligned Residues61
% Identity16%Templatec2g1uA_
PDB info PDB header:transport proteinChain: A: PDB Molecule:hypothetical protein tm1088a; PDBTitle: crystal structure of a putative transport protein (tm1088a) from2 thermotoga maritima at 1.50 a resolution
Resolution1.50 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   205....210.........220.........230.........240.........250.........260.........270........
Predicted Secondary structure 
























Query SS confidence 









































































Query Sequence  ENSQVVVLWGMNPLNTLKIAWSSTDEQGLEYFHQLKKSGKPVIAIDPIRSETIEFFDDNATWIAPNMGTDVALM
Query Conservation    

 

  
 

  
                  
   
 







 
 

  

     
 
 



 

 
Alig confidence 













.............














































Template Conservation       


 
 
  .............
  

  
   
  



                     
      
Template Sequence  QKSKYIVIFGCGRL. . . . . . . . . . . . . GSLIANLASSSGHSVVVVDKNEYAFHRLNSEFSGFTVVGDAAEFETL
Template Known Secondary structure 





S.............TT
S
GGGGGGS
TT

SS
TTS
Template Predicted Secondary structure 






.............











Template SS confidence 









































































   5....10........ .20.........30.........40.........50.........60.....
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions