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Job DescriptionP46923
Confidence82.74%DateThu Jan 5 12:04:40 GMT 2012
Rank92Aligned Residues197
% Identity13%Templatec2djiA_
PDB info PDB header:oxidoreductaseChain: A: PDB Molecule:pyruvate oxidase; PDBTitle: crystal structure of pyruvate oxidase from aerococcus2 viridans containing fad
Resolution1.60 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   116...120.........130.........140.........150.........160.........170.........180.........190.....
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Query Sequence  EQALKLIHEQHDRIRKANGPSAIFAGSYGWRSSGVLHKAQTLLQRYMNLAGGYSGHSGDYSTGAAQVIMPHVVGSVEVYE
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Template Sequence  AQDIDAAVELLNN. . . . . . SKRPVIYAGIGTMG. . . . . HGPAVQELARKIKAPVITTG. KNFETFEWDFEALTGSTYRVG
Template Known Secondary structure  T......
SS
GGGTT.....
T


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TT
TTB


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   194.....200...... ...210.........220 .........230.........240 .........250.........260.
 
   196...200.........210.........220.........230.........240.........250.........260.........270.....
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Query Sequence  QQTSWPLILENSQVVVLWGMNPLNTLKIAWSSTDEQGLEYFHQLKKSGKPVIAIDPIRSETIEFFDDNATWIAPNMGTDV
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Template Sequence  WKPANET. ILEADTVLFAGSNFPFSEVEGTF. . . . . . . . . . . . . . RNVDNFIQIDIDPAMLGKRHH. . . ADVAIL. . GDA
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TTTTTTTTT..............TT
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GGGTTSSS
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   262...... .270.........280.........290. ........300.........310.. ...... .320.
 
   276...280.........290.........300.........310.........320.........330.........340.........350....
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Query Sequence  ALMLGIAHTLMTQGKHDKVFLEKYTTGYPQFEEYLTGKSDNTPKSAVWAAEITGVPEAQIVKLAELMAANRTMLMAGWG
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Template Sequence  ALAIDEILNKVDA. VEESAWWTANLKNIANWREYI. . . . . . . . . NMLETKEEGDLQFYQVYNAINNHADEDAIYSIDVG
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   322.......330.... .....340.........350..... ....360.........370.........380.........390
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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