Job Description P46923 Confidence 78.03% Date Thu Jan 5 12:04:40 GMT 2012 Rank 104 Aligned Residues 176 % Identity 15% Template c2decA_ PDB info PDB header:structural genomics, unknown function Chain: A: PDB Molecule:325aa long hypothetical protein; PDBTitle: crystal structure of the ph0510 protein from pyrococcus horikoshii ot3 Resolution 1.70 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		117	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.		.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.
Predicted Secondary structure																		.
Query SS confidence																		.
Query Sequence		Q	A	L	K	L	I	H	E	Q	H	D	R	I	R	K	A	.	N	G	P	S	A	I	F	A	G	S	Y	G	W	R	S	S	G	V	L	H	K	A	Q	T	L	L	Q	R	Y	M	N	L	A	G	G	Y	S	G	H	S	G	D	Y	S	T	G	A	A	Q	V	I	M	P	H	V	V	G	S	V	E	V	Y	E
Query Conservation																		.
Alig confidence																		.											.	.	.	.	.																																						.	.	.	.	.	.	.	.	.	.	.
Template Conservation																													.	.	.	.	.																																						.	.	.	.	.	.	.	.	.	.	.
Template Sequence		D	G	I	I	K	A	D	K	V	F	N	K	V	K	D	K	I	S	L	P	N	R	I	L	Y	L	G	.	.	.	.	.	C	G	S	S	H	F	L	S	K	L	L	A	M	V	T	N	M	H	G	G	L	G	I	A	L	P	C	S	E	F	L	Y	S	K	E	T	Y	.	.	.	.	.	.	.	.	.	.	.
Template Known Secondary structure															T	T	T					S							.	.	.	.	.	S	T																T	T	S														G	G	G	S	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																													.	.	.	.	.																																						.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		12	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.						.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.
		196	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.			.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.
Predicted Secondary structure																				.	.																																																												.
Query SS confidence																				.	.																																																												.
Query Sequence		Q	Q	T	S	W	P	L	I	L	E	N	S	Q	V	V	V	L	W	.	.	G	M	N	P	L	N	T	L	K	I	A	W	S	S	T	D	E	Q	G	L	E	Y	F	H	Q	L	K	K	S	G	K	P	V	I	A	I	D	P	I	R	S	E	T	I	E	F	F	D	D	N	A	T	W	I	A	P	N	M	G	.
Query Conservation																				.	.																																																												.
Alig confidence		.	.	.	.	.	.	.												.	.								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																											.	.	.									.
Template Conservation		.	.	.	.	.	.	.																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																											.	.	.
Template Sequence		.	.	.	.	.	.	.	P	I	G	E	V	E	L	A	V	G	I	S	R	S	G	E	T	T	E	I	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	L	L	A	L	E	K	I	N	V	K	K	L	G	I	T	T	R	E	S	S	L	T	R	M	C	D	.	.	.	Y	S	L	V	V	P	A	I	E
Template Known Secondary structure		.	.	.	.	.	.	.				S		S							S	S	S						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.						T			S							S	S	S	S						S	S	.	.	.
Template Predicted Secondary structure		.	.	.	.	.	.	.																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																											.	.	.
Template SS confidence
									76	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.																.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.				.	.	.	.	.	.	.	.	130
									273	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.
Predicted Secondary structure		.	.	.	.	.	.	.
Query SS confidence		.	.	.	.	.	.	.
Query Sequence		.	.	.	.	.	.	.	T	D	V	A	L	M	L	G	I	A	H	T	L	M	T	Q	G	K	H	D	K	V	F	L	E	K	Y	T	T	G	Y	P	Q	F	E	E	Y	L	T	G	K	S	D	N	T	P	K	S	A	V	W	A	A	E	I	T	G	V	P	E	A	Q	I	V	K	L	A	E	L	M	A	A	N
Query Conservation		.	.	.	.	.	.	.
Alig confidence		.	.	.	.	.	.	.																																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.												.
Template Conservation																																														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.												.
Template Sequence		E	S	V	V	M	T	H	S	F	T	S	F	Y	F	A	Y	L	Q	L	L	R	Y	S	Y	G	L	P	P	L	N	A	G	E	I	S	K	A	T	E	K	S	L	E	Y	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	E	R	Y	I	R	E	I	V	E	S	F	.	D	F
Template Known Secondary structure			S	S	S																				T	T																		T	T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.												.
Template Predicted Secondary structure																																														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.												.
Template SS confidence
		131	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.																							.	.	.	.	.	180	.	.	.	.	.		.	.
		346	.	.	.	350	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		R	T	M	L	M	A	G	W	G	I	Q
Query Conservation
Alig confidence
Template Conservation
Template Sequence		Q	N	I	I	F	L	G	S	G	L	L
Template Known Secondary structure		S								T	T
Template Predicted Secondary structure
Template SS confidence
		188	.	190	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions