Job Description P46923 Confidence 81.21% Date Thu Jan 5 12:04:40 GMT 2012 Rank 97 Aligned Residues 189 % Identity 19% Template c2amlB_ PDB info PDB header:transferase Chain: B: PDB Molecule:sis domain protein; PDBTitle: crystal structure of lmo0035 protein (46906266) from listeria2 monocytogenes 4b f2365 at 1.50 a resolution Resolution 1.50 Å

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		117	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.							.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190
Predicted Secondary structure																		.	.	.	.	.	.
Query SS confidence																		.	.	.	.	.	.
Query Sequence		Q	A	L	K	L	I	H	E	Q	H	D	R	I	R	K	A	.	.	.	.	.	.	N	G	P	S	A	I	F	A	G	S	Y	G	W	R	S	S	G	V	L	H	K	A	Q	T	L	L	Q	R	Y	M	N	L	A	G	G	Y	S	G	H	S	G	D	Y	S	T	G	A	A	Q	V	I	M	P	H	V	V	G	S
Query Conservation																		.	.	.	.	.	.
Alig confidence																		.	.	.	.	.	.											.	.	.	.	.																																		.	.	.	.	.	.	.	.	.	.
Template Conservation																																		.	.	.	.	.																																		.	.	.	.	.	.	.	.	.	.
Template Sequence		E	X	C	R	V	I	L	A	D	F	Q	T	N	A	E	K	L	E	S	L	V	K	N	G	A	K	E	W	L	I	L	A	.	.	.	.	.	T	G	S	S	L	N	A	A	Q	S	A	K	Y	Y	I	E	N	L	A	D	V	R	I	T	I	E	E	P	F	N	H	L	Y	.	.	.	.	.	.	.	.	.	.
Template Known Secondary structure																							T	T			S							.	.	.	.	.																			S	S														.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																																		.	.	.	.	.																																		.	.	.	.	.	.	.	.	.	.
Template SS confidence
		14	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.						.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.
		191	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.		240	.	.	.	.	.	.	.	.	.		250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.
Predicted Secondary structure																																																			.											.
Query SS confidence																																																			.											.
Query Sequence		V	E	V	Y	E	Q	Q	T	S	W	P	L	I	L	E	N	S	Q	V	V	V	L	W	G	M	N	P	L	N	T	L	K	I	A	W	S	S	T	D	E	Q	G	L	E	Y	F	H	Q	L	.	K	K	S	G	K	P	V	I	A	I	.	D	P	I	R	S	E	T	I	E	F	F	D	D	N	A	T	W	I	A
Query Conservation																																																			.											.
Alig confidence		.	.	.	.	.	.	.	.	.	.																									.	.	.	.	.	.	.	.	.							.											.													.	.	.
Template Conservation		.	.	.	.	.	.	.	.	.	.																									.	.	.	.	.	.	.	.	.																															.	.	.
Template Sequence		.	.	.	.	.	.	.	.	.	.	Y	E	K	L	S	S	H	L	D	L	V	I	G	I	S	Q	S	G	Q	S	T	S	T	I	.	.	.	.	.	.	.	.	.	S	A	L	E	R	V	K	K	E	A	S	V	P	V	V	A	L	T	S	D	V	T	S	E	I	A	E	F	A	D	.	.	.	I	T	L	D
Template Known Secondary structure		.	.	.	.	.	.	.	.	.	.						T	T									S	S	S		B					.	.	.	.	.	.	.	.	.																			S		T	T	S	G	G	G	G	G		S	.	.	.
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.																									.	.	.	.	.	.	.	.	.																															.	.	.
Template SS confidence
												79	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.										.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.				.	.	.	.
		269	270	.	.														.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.
Predicted Secondary structure						.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence						.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		P	N	M	G	.	.	.	.	.	.	.	.	.	.	.	.	.	T	D	V	A	L	M	L	G	I	A	H	T	L	M	T	Q	G	K	H	D	K	V	F	L	E	K	Y	T	T	G	Y	P	Q	F	E	E	Y	L	T	G	K	S	D	N	T	P	K	S	A	V	W	A	A	E	I	T	G	V	P	E	A	Q	I
Query Conservation						.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence						.	.	.	.	.	.	.	.	.	.	.	.	.																																														.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																																																.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		I	G	S	G	K	E	R	V	G	Y	V	T	K	G	F	T	A	T	V	L	T	L	X	L	T	G	L	H	F	A	Y	K	T	V	Q	I	D	E	T	R	F	N	N	E	I	S	A	F	S	R	A	I	D	A	I	P	A	T	I	A	E	T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	E	A	F	Y
Template Known Secondary structure			S						S	S	S		S																					T	T	S	S																		T									.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																																																																.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		137	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.															.	200	.	.
		336	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	K	L	A	E	L	M	A	A	N	R	T	M	L	M	A	G	W	G	I	Q
Query Conservation
Alig confidence
Template Conservation
Template Sequence		E	R	W	Q	E	E	F	A	T	A	P	K	F	T	A	I	G	Y	G	P	T
Template Known Secondary structure									T	T										T	T
Template Predicted Secondary structure
Template SS confidence
		203	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions